Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00394 ATGGAGAAGATGAGAATAGAAGAGGTTCAGTCAACTACCAAGAAGCAACGCGTTGCTACTCATACTCACATCAAAGGCTTAGGCCTTGAGGCTAGTGGAAGAGCATTGCCTTTTGCTTCTGGTTTTGTGGGACAAGCAGAGGCAAGAGAAGCATGTGGCCTTGTGGTTGACATGATAAGGCAGAAGAAGATGGCTGGCAGGGCACTCCTCCTTGCCGGTCCACCCGGTACCGGCAAGACTGCATTGGCACTAGGGATAAGTCAAGAGCTTGGAACCAAGGTTCCATTTTGCCCTATGGTTGGCTCAGAAGTATACTCGTCCGAGGTAAAGAAGACAGAGGTTCTGATGGAGAATTTTCGACGGGCTATTGGTCTGCGTATCAAGGAAAACAAGGAAGTTTATGAAGGAGAGGTAACCGAGCTCTCCCCTGAAGAAACTGAGAGTGTAACAGGCGGTTATGGTAAAAGTATAAGCCATGTAATAATTGGATTGAAAACTGTGAAAGGAACCAAGCAACTGAAGTTGGACCCCACCATATATGATGCCTTGATTAAGGAAAAGGTAGCTGTTGGAGATGTTATATACATCGAAGCAAATAGTGGAGCTGTGAAAAGGGTGGGCCGAAGTGATGCTTTCGCTACAGAGTTTGACCTTGAAGCAGAAGAGTATGTCCCACTTCCTAAGGGAGAGGTTCACAAGAAAAAAGAGATTGTTCAGGATGTAACGCTACATGATCTGGATGCTGCCAATGCACGACCTCAAGGTGGGCAAGATATTCTGTCTCTTATGGGACAGATGATGAAACCTAGGAAAACAGAAATCACTGACAAGCTGAGACAAGAAATTAACAAGGTTGTCAACCGATATATTGATGAAGGTGTAGCAGAGCTTGTCCCTGGAGTTCTATTTATTGATGAGGTGCACATGCTAGATATGGAATGCTTTTCCTATTTGAATCGTGCTTTAGAGAGCTCGCTCTCTCCAATAGTAATTTTTGCTACAAACAGAGGGATATGCAATGTGAGAGGGACCGACATGACCAGCCCTCATGGCATACCTGTTGACCTCTTGGATAGGTTGGTAATCATTCGAACACAAACGTATGGTCCNGCTTTTCAATATATTCTAGCTATTCGTGCTCAAGTAGAGGAGCTGGTTGTTGATGAGGAAAGTTTAGCATTCCTCGGGGAAATTGGACAACGGACATCTTTAAGGCATGCTGTTCAACTTCTATCACCTGCCAGCGTTGTATCAAAAATGAATGGCCGAGACAGCATCTGCAAGGGGGATCTTGATGAAGTTTGTTCGCTATACTTGGACGCTAAGTCATCAGCCAGGCTACTTCAAGAGCAGCAGGATAAATACATCTCATAA 1374 0.4483 MEKMRIEEVQSTTKKQRVATHTHIKGLGLEASGRALPFASGFVGQAEAREACGLVVDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTQTYGXAFQYILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVSKMNGRDSICKGDLDEVCSLYLDAKSSARLLQEQQDKYIS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00394 457 Gene3D - 371 457 - -
Aip09g00394 457 Gene3D - 13 365 IPR027417 -
Aip09g00394 457 SMART AAA_5 65 367 IPR003593 -
Aip09g00394 457 Pfam TIP49 AAA-lid domain 375 440 IPR041048 -
Aip09g00394 457 PANTHER RUVB-LIKE HELICASE 3 457 - -
Aip09g00394 457 Gene3D - 122 247 IPR042487 -
Aip09g00394 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 438 IPR027417 -
Aip09g00394 457 CDD AAA 43 133 - -
Aip09g00394 457 Pfam TIP49 P-loop domain 17 368 IPR010339 GO:0005524
Aip09g00394 457 PANTHER RUVB-RELATED REPTIN AND PONTIN 3 457 IPR027238 GO:0008094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00394 Aip-Chr9 3964090 3967645 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00394 K04499 - gmx:102659805 853.203