Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00386 ATGCGGGGACGGCAGCGAGTTGCATCCAGAGATTACATAATTGGGCATGGAAAAGAAGAAAATTCAGCTTCAGTGCGTTTACCGAACGCAAAACCTTGGCGGCGATCTTTGCGGCATGTTGTAGTGGCTTCTCTATCTTCATTCTTATATGGCTACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTGAAGATCTTGACTTTAGTGGCAATACAATGGCTGAAGGTCTTGTAGTAAGTACCTGTTTAGGAGGTGCTTTTGTTGGGTCTCTGTTTAGTGGTTGGATCGCAGATGGGGTTGGGCGTAAAAGAAGTTTCCAGTTGTGTGCATTGCCCCACTTTCTCGTGCTTTCTTTTGCAACAGCAAATAGCCTGTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACCGGAATGGGACTTGGCCCACCTGTTGCTGCTCTTTATGTGGCTGAGGTATCACCTCCAGCTGTGCGGGGTACTTTTGGGGCTTTAACTCAGATTGCAACATGTCTTGGACTTATGGGTTCTTTCTTTATAGGAATCCCAGCCAAGGAAATAGTGGGTTGTTGCATTTCATGTGGAAATTATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAAGGTTGTCTTTGCAGAGGGAAAACCATTGAAGCTGAGGCTGAATTTGAGAAGCTCTTGGGAGGAGTAAATGTGAAATCCGCAATGGCTGACCTGTCAAAGTCTGATAGAGGTGATGAGTCTAGTTCTGTAAAACTATCGGAATTACTCTGTGGCTGCCATGCTAGAGTGATGTTCATTGGTTCTGTGCTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCTGTGTTCTATTTCTCATCGACTGTCTTTGAAAGCTTTGGTGTACCATCTGATCTTGCAAATATGAGCGTGGGAGTTTGCAATTTATTGGGATCAATTGTAGCAATGATTCTGATGGATAAACTTGGAAGAAAAGTGCTTCTCATGGGTAGCTTTTTCGGCATGGCAGTAGCAATGGGTCTACAAGTTCTTGCTGCAAGTTCATTTGCAGCAGGATCTGGAGCAATGTATCTATCCGTTGGTGGCATGTTGCTGTTTGTGCTATCATTTGCACTTGGGGCCGGTCCGGTTCCTTGTCTCGTTATGTCTGAAATGCTACCCGGCAAGATCAGAGCAAAGGCGATGGCAATTTGCTTGGCTGCGCACTGGGTGATAAACTTCTTTGTGGGTCTACTGTTTTTGCGCTTGCTGGAGCAAATTGGGGCACAACTCTTGTATAGTATTTTTGGTTCATTCTGTCTGATAGCAGTGGCTTTTGTGAAGAAGTATATTCTTGAAACAAAAGGGAAGTCACTACAGGAAATTGAGATAGCACTTCTTGCTCAAGAAGCATCATAA 1431 0.4263 MRGRQRVASRDYIIGHGKEENSASVRLPNAKPWRRSLRHVVVASLSSFLYGYHIGVVNETLESISEDLDFSGNTMAEGLVVSTCLGGAFVGSLFSGWIADGVGRKRSFQLCALPHFLVLSFATANSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTFGALTQIATCLGLMGSFFIGIPAKEIVGCCISCGNYXXXXXXXXXXXXXXXXXXQGCLCRGKTIEAEAEFEKLLGGVNVKSAMADLSKSDRGDESSSVKLSELLCGCHARVMFIGSVLFALQQLSGINAVFYFSSTVFESFGVPSDLANMSVGVCNLLGSIVAMILMDKLGRKVLLMGSFFGMAVAMGLQVLAASSFAAGSGAMYLSVGGMLLFVLSFALGAGPVPCLVMSEMLPGKIRAKAMAICLAAHWVINFFVGLLFLRLLEQIGAQLLYSIFGSFCLIAVAFVKKYILETKGKSLQEIEIALLAQEAS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00386 476 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 459 IPR020846 GO:0022857
Aip09g00386 476 PANTHER - 5 473 IPR045263 -
Aip09g00386 476 Gene3D MFS general substrate transporter like domains 30 192 IPR036259 -
Aip09g00386 476 Gene3D MFS general substrate transporter like domains 220 471 IPR036259 -
Aip09g00386 476 PRINTS Sugar transporter signature 371 392 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip09g00386 476 PRINTS Sugar transporter signature 131 150 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip09g00386 476 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip09g00386 476 PRINTS Sugar transporter signature 394 406 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip09g00386 476 PRINTS Sugar transporter signature 47 57 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip09g00386 476 Pfam Sugar (and other) transporter 223 468 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip09g00386 476 Pfam Sugar (and other) transporter 40 186 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip09g00386 476 CDD MFS_GLUT_like 42 457 - -
Aip09g00386 476 SUPERFAMILY MFS general substrate transporter 27 467 IPR036259 -
Aip09g00386 476 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 5 473 - -
Aip09g00386 476 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip09g00386 476 ProSitePatterns Sugar transport proteins signature 1. 326 342 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00386 Aip-Chr9 3864362 3868241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00386 5 415 Organic Solute Cotransporters AT1G67300 59.953 2.25e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00386 - - aprc:113857086 725.702