Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00332 ATGCCATCAGCAACAACTACTTCAGATTCTGGGGGACAAAAAATGTTTCGGTGGTTCTTGAAACCAAGGTTCTACTCAAAATGCTTGACGTACGTGAAGTTCATAAGGACGAGGCTAGAGAGTGTACAAAAGAAGAGGAATGCGGTTCATAGGATTATGAAGAGTGACATTGCAGAGCTTCTCAGGAATGGACATTATTATGATGCTTATAAAAGGGTTGAAGGGCTTGTATTGGAGCAAAATATGTTATTTTGTTATGAACTTGTTGCACAATTCATTGGATGCATATCAGATCATGTTCAAGACTTAACTAAGCAGAGTATTTGCCCTGATGAATGCAAAGAAGCTGTTCCATCATTGATATATGCTGCAGCAAGAATTTCTGATCTTCCAGAATTGCGTGACCTCAGAACAATGTTTACAGATAAATTTGGAAATTCTCTTGAACCTTATACAAGTAAAGAGTTAATTGAGAAGTTGAAGAAAGATCCTCCTTCTAGAGAAATGAAGATTCAATTATTGCATGAAATAGCACAAGAGTTCTCTATAGAGTGGGATAGCAAAGCTTTGGAGCAAAGGCTTTCTAGACAGCCATCATTGTATGAAGAGAGGCCTAAACCTGAAAAAACAGAGAAGCAAGTTGGTGTGGAAAAAGAGCACAAAAAAGAAACAGACTATAATGCATCATCACAAGAAGGAATCAAAGAATTCAATGATGAACAATGGAGGCAGCAAATCAGCAGTGACGACGACGACGATTCTAGCACCGATATGTCATCGGTCCACGGCCGAAAGCCGAGTTCTAGCTCCCTCGGAAGCATATCCGAGGATGACACAGAAATCATCAGTAACAAGAAACCTTATTGGCTTGTTCCTCCTCCTTACCTCAAACAAAGAACTAACAAAGGCGAAATCAATTCAAATTCAAAGAAGAAAACAAGGACAGATTCGGAACCAAACCATGAGGATCAAGCTCCAAGATCATCATCAAGGAGCAGAAACATGATGAAATCAAGAGCAACAGAGGATAACATTATTGATTCTGAATCTTCCAAGAACAGAAGATCATATGTAAGAGGAACATCTCTTCCTCCTAGACCAACAAACTCATCATCAGTTGAAGAAACATCAAGAGGGCATGGAAGATCAATTTCAATGGATTCTGAAGTGAAGAGTATTGTGCATCCTAATCTACCTGATTATGATGATTTGGCAGCTCGTCTTAGAGCTCTCAGAGGAACATAA 1245 0.392 MPSATTTSDSGGQKMFRWFLKPRFYSKCLTYVKFIRTRLESVQKKRNAVHRIMKSDIAELLRNGHYYDAYKRVEGLVLEQNMLFCYELVAQFIGCISDHVQDLTKQSICPDECKEAVPSLIYAAARISDLPELRDLRTMFTDKFGNSLEPYTSKELIEKLKKDPPSREMKIQLLHEIAQEFSIEWDSKALEQRLSRQPSLYEERPKPEKTEKQVGVEKEHKKETDYNASSQEGIKEFNDEQWRQQISSDDDDDSSTDMSSVHGRKPSSSSLGSISEDDTEIISNKKPYWLVPPPYLKQRTNKGEINSNSKKKTRTDSEPNHEDQAPRSSSRSRNMMKSRATEDNIIDSESSKNRRSYVRGTSLPPRPTNSSSVEETSRGHGRSISMDSEVKSIVHPNLPDYDDLAARLRALRGT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00332 414 Gene3D - 20 191 IPR042277 -
Aip09g00332 414 Pfam Regulator of Vps4 activity in the MVB pathway 31 183 IPR005061 GO:0015031
Aip09g00332 414 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 22 413 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 236 259 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 260 278 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 196 397 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 304 328 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 336 354 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 355 379 - -
Aip09g00332 414 MobiDBLite consensus disorder prediction 196 229 - -
Aip09g00332 414 PANTHER IST1 FAMILY MEMBER 22 413 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00332 Aip-Chr9 3149237 3152459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00332 - - ahf:112709856 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00332 09 3149237 3152459 Aip09g00332 09 3149237 3152459 ECH