Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00314 ATGTTCTATGGTGCGGTGGTATGGGATCCTTGGCTCATTGTTGCTCAGATTGTGTGTCTGCAATGCTTGTACTATATAACTCTGGGAATCTTGTTGTCCTTGCTTGTTGGAACTCGCGTGTCTCGGCTGAGCCTAGTGTATTTCTTTGACTATGCTACCATCACTACCTCCACGGTTACCGGTTGGTGTGTTATTGCTGCGATTCTGATCAGCTCAGTTGCAGGGGCCATATATATGCTTTATTTGATTGAAAGAGCAAAAAAGTGCTTGGATTTTTCAGCCACTCTCTACATCATTCATCTTTTCATATGCATTGTATATGGAGGCTGGCCCTCTTCTATAACATGGTGGATTGTGAATGGTACGGGACTTGCAGCAATGGCTTTACTAGGTGAATATCTGTGCATCAGGCGTGAACTCCGGGAGATACCTATAACACGATATCGTTCAAATGTTTGA 459 0.4379 MFYGAVVWDPWLIVAQIVCLQCLYYITLGILLSLLVGTRVSRLSLVYFFDYATITTSTVTGWCVIAAILISSVAGAIYMLYLIERAKKCLDFSATLYIIHLFICIVYGGWPSSITWWIVNGTGLAAMALLGEYLCIRRELREIPITRYRSNV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00314 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
Aip09g00314 152 PANTHER SYS1 1 152 IPR019185 -
Aip09g00314 152 PANTHER PROTEIN SYS1 HOMOLOG 1 152 - -
Aip09g00314 152 PIRSF SYS1_homolog 1 152 IPR016973 GO:0000139
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00314 Aip-Chr9 3030171 3032386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00314 K20318 - tcc:18595890 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00314 09 3030171 3032386 Aip09g00314 09 3030171 3032386 ECH