Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00293 ATGGGTGCTTCGCTGCCCCCGAAGGAGGCCAACCTCTTCAAGCTCATTGTTAAATCGTATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCAGATGCCATCTTGAAAAAATTCCCAGATCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAGTCAGAAGCATATGAACTTGTCCGTCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTCTTTGGTCTCCTTTATCGATCAGACAGAGAATACAGGGAGGCGATCAAGTGCTACCGAAATGCACTGAAAATTGATCCTGACAATATTGAAATCCTACGTGACCTGTCTCTCTTACAGGCTCAAATGCGGGATTTAAGTGGCTTTGTTGAGACAAGACAGCAACTTTTAACTCTGAAACCAAATCATCGCATGAACTGGATTGGTTTTTCTGTTGCCCATCATTTGAACTCTAATGCATCCAAGGCAGTTGAAATTTTGGAAGCATATGAAGGGACTTTAGAAGATGATTATCCTCCGGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATATAAGATCTCTTTATTAGAGGAATGCGGATTGCTTGAGAGCGCTTTGGAGGAGTTGCGCAAAAAGGAATCAAAAATTGTTGATAAGCTTGAATATAAAGAACAAGAGGTTTCACTTCTAGTGAAGCTTGGTCGTTTAGAAGAAGGCGAAGTCTTGTACCAGGCATTACTTTCCATGAATCCTGATAACTATAGGTACTATGAAGGTCTCCAAAAATGTGTTGGGTTGTATTCAGTGAATGGCCAGTACTCACCGGATGAAATAGATCGATTGGATTCCTTGTACAAATCACTTGGCCAGCAGTATAAATGGTCTTCTGCTGTTAAGAGAATACCCCTAGATTTTTTGCAAGGTGACAAATTTAGAGCAGCAGCAGATAATTATATTAGGCCTCTCCTTACTAAGGGAGTTCCATCTCTTTTCTCAGATCTTTCGTCTTTGTATAATCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTCGAGTTAGAGCATTCAATTAGGACGTCCGGCCAATATCCCGGGAGGGTGGAAAAAGAACCCCCTTCAACTCTTATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGACGAGGCCAATATGAAGTTGCTCTTTCCAAAATTGACGAGGCCATAGAACACACACCTACTGTTATTGATCTATATTCCGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTTGCTGCTGCTGCTGCATTTGCAGATGAAGCCAGGTGTATGGATCTTGCCGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCTGAAAAAACTGCTGTACTGTTTACAAAAGATGGTGATCAACACAACAACCTTCATGACATGCAATGCATGTGGTATGAGCTAGCCTCTGGTGAAAGCTATTTCCGTCAGGGTGATCTTGGACGGGCACTGAAGAAGTTTTTAGCAGTTGAAAAACATTATGCAGATATTACTGAAGATCAATTTGATTTTCACTCATACTGCTTGAGGAAAATGACTTTGCGTACTTATGTGGAAATGCTTAAATTTCAAGACCGGTTGCACTCACATGTTTATTTTGAGAAAGCAGCAGCTGGAGCTATCAGATGCTATATTAAGTTGCATGATTCTCCCCCGAAGTCTACAACTGAGGAAGACGACGAAATGTCAAAATTGCTTCCTTCTCAAAAGAAGAAAATGAGACAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAGAATGAAGAGTTGAATGCCGGCGGGGCTTCAAAGTCTGGGAAACGACATGTAAAACCTGTTGATCCTGATCCACATGGGGAGAAGTTGTTGCAGGTGGAAGATCCACTGTCAGAAGCCACGAAGTACTTGAAGTTGCTGCAGAAGAATTCACCTGATTCCTTGGAAACACACTTGCTTGCTTTTGAATGTTATACAAGACGAAATAAGATTTTGCTTGCACTACAGGCTGTGAAGCGATTGCTGAGGTTGGATGCCGAACATCCCGATTCTCATCGTTGCTTGATTAAATTATTCCATATAGTGGGGTCCATGAATGCACCTGTGACTGATGGCGAGAAACTGATTTGGAGTGTCTTAGAAGCTGAGCGCTCAACCATCAGCCAGCTGCATGAGAAATCTCTGGTTGAGGCTAACAACGCTTTCCTTGAAAATCATAAAGATTCTCTCATGCACAGAGCGGCTTTTGCAGAAATCTTGAGCATTTTGGATTTGAACAGAAAGTCTGAGGCTGTCAAGTTGGTTGAAGAGTCAACAAACAATTTTGTGCCAAGTAATGGAGCACTTGGACCAATCAGGGAATGGACACTTAAAGACTGTATTGCTGTTCACAAACTTCTTGGGACAATACTACATGATCAGGATGCTGCATTGAGATGGAAATCACGATGTGCTGAGTACTTCCCTTATTCTACATACTTCGAAGGCAGCTGCAGTTCAGTCTCTCCAAACTCGATCTACAGTCAGTTAAGCAAAAACTCTGAGCATGAAAGTTCGAACCATTCGACGGGTAGTCAGAATGCGGGCCCTATCAAATCAAATGGGAAACTGGATGCATTCAAAGATCTCACTATCTGA 2706 0.4194 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECGLLESALEELRKKESKIVDKLEYKEQEVSLLVKLGRLEEGEVLYQALLSMNPDNYRYYEGLQKCVGLYSVNGQYSPDEIDRLDSLYKSLGQQYKWSSAVKRIPLDFLQGDKFRAAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRTSGQYPGRVEKEPPSTLMWTLFLLAQHYDRRGQYEVALSKIDEAIEHTPTVIDLYSVKSRILKHAGDFAAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHVYFEKAAAGAIRCYIKLHDSPPKSTTEEDDEMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEELNAGGASKSGKRHVKPVDPDPHGEKLLQVEDPLSEATKYLKLLQKNSPDSLETHLLAFECYTRRNKILLALQAVKRLLRLDAEHPDSHRCLIKLFHIVGSMNAPVTDGEKLIWSVLEAERSTISQLHEKSLVEANNAFLENHKDSLMHRAAFAEILSILDLNRKSEAVKLVEESTNNFVPSNGALGPIREWTLKDCIAVHKLLGTILHDQDAALRWKSRCAEYFPYSTYFEGSCSSVSPNSIYSQLSKNSEHESSNHSTGSQNAGPIKSNGKLDAFKDLTI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00293 901 PANTHER BNAC02G23120D PROTEIN 10 872 - -
Aip09g00293 901 MobiDBLite consensus disorder prediction 575 645 - -
Aip09g00293 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Aip09g00293 901 Pfam TPR repeat 84 123 - -
Aip09g00293 901 MobiDBLite consensus disorder prediction 577 594 - -
Aip09g00293 901 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Aip09g00293 901 PIRSF NAT_A 1 818 IPR021183 -
Aip09g00293 901 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Aip09g00293 901 MobiDBLite consensus disorder prediction 865 888 - -
Aip09g00293 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Aip09g00293 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Aip09g00293 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Aip09g00293 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Aip09g00293 901 MobiDBLite consensus disorder prediction 606 622 - -
Aip09g00293 901 Coils Coil 596 624 - -
Aip09g00293 901 Gene3D - 505 725 - -
Aip09g00293 901 Coils Coil 195 229 - -
Aip09g00293 901 MobiDBLite consensus disorder prediction 865 891 - -
Aip09g00293 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 872 - -
Aip09g00293 901 MobiDBLite consensus disorder prediction 631 645 - -
Aip09g00293 901 Gene3D - 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00293 Aip-Chr9 2839340 2851925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00293 K20792 - gmx:100820094 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00293 09 2839340 2851925 Aip09g00293 09 2839340 2851925 ECH