Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00275 ATGGATTATGAAGAACATTCATCTAATTCCCAAGTTCCTATTATCAATTTCAGTGATGAAAATTTGAAACCTGGCACTGAAAACTGGGATTCTGCAAGCCAAGTAATAAAGGGAGCACTAGAGGACCATGGTTGTTTCTATGCACTATCTTATAAAGTTCCTATGGAACTTAACAACAAAGTTTTTGGTCTAATGGAAGAACTATTTGATCTTCCATTGGAAACAAAGATGCAAAAGATTAGTGACAAGCCTTACCATGGTTATTATGGGCCACATCCTAGTGTTCCTCTATATGAATCATTAGGGATCCCTGACCCTTTAACTATGGAAAATGTTCAACACTTCACTAGGGTTATGTGGCCACAAGGATATCATCATTTCAGCGAGAGTCTTAATATATATGCAAAATTGGTGGTAGAATTGGACCATATTGCTAAAAGAATGGTGTGTGATGGGTATGGTCTAGAAGAAAGGCACTATCATGACCTAATTGAATCAACAAGTTATTTGCTTCGGAGCTTTAGATATGCACTTCCAAAGAAGGATGAGAGTAATTTGGGATTGATGCCTCACAAGGACACTTCTTTCTTCACCATATTGCACCAAAATAATGTAACTGGATTACAGGTTAAATTGAAAAATGGAGAGTGGTTTGATATTGATCCTTCACCCTTCATGTTTCTCATTCTTGCTGGGGAATCATTTCAGGTGGCTCACTACTTGCAATTTTATCATTATCTTCTGCATACTATAATAATGCACTGCATCAATAATAATAATGAGAAATGCtatttgtacaccaaaatcagctactaa 816 0.3529 MDYEEHSSNSQVPIINFSDENLKPGTENWDSASQVIKGALEDHGCFYALSYKVPMELNNKVFGLMEELFDLPLETKMQKISDKPYHGYYGPHPSVPLYESLGIPDPLTMENVQHFTRVMWPQGYHHFSESLNIYAKLVVELDHIAKRMVCDGYGLEERHYHDLIESTSYLLRSFRYALPKKDESNLGLMPHKDTSFFTILHQNNVTGLQVKLKNGEWFDIDPSPFMFLILAGESFQVAHYLQFYHYLLHTIIMHCINNNNEKCYLYTKISY 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00275 271 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 238 - -
Aip09g00275 271 Pfam 2OG-Fe(II) oxygenase superfamily 173 257 IPR044861 -
Aip09g00275 271 Gene3D - 1 257 IPR027443 -
Aip09g00275 271 SUPERFAMILY Clavaminate synthase-like 8 237 - -
Aip09g00275 271 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 91 IPR026992 -
Aip09g00275 271 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 9 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00275 Aip-Chr9 2549149 2550922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00275 2 243 Glycosyltransferase AT5G59530 23.735 1.69e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00275 - - adu:107463741 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00275 09 2549149 2550922 Aip09g00275 09 2549149 2550922 ECH