Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00262 ATGTTATCCGGGTCGGGTTCATCGGTGATGTGGTTTCGGAAAGGTCTTCGGATCCACGACAACCCGGCGCTACAACTTGCTTCACAAGGCGCGTCTCATCTCTACCCGCTATTCGTGGTGGACCCGCATTATATGGAGCCTGACCCGACCTCATTCTCGCCCGGTTCGTCGCGCGCGGGTCTTAACCGCATCAAGTTCTTGCTGGAGAGTCTTGTGGACTTGGATCTCAGCCTCAAGAACCTTGGCTCGCGTTTATTGGTTCTTAAGGGTGACCCTGCCGAAGTTCTCATTCGCTGCTTGAAGGAGTGGAACGTCAGAAAGCTATGTTTTGAGTATGACACTGAGCCATATTATCAGGCTCTAGATACTAAAGTAAAGAACTTTGCACTTGGAGCTGGGATTGAGGTTTTCTCTCCTGTGAGTCACACACTCTTCAATCCCACAGAAATTATAGAGAGGAACGGAGGGAAGCCACCACTTACTTATCAATCATTCACCAAAATTGCGGGGCAACCACCGCCACCTCTCACAATCACACACTCTTCTCTTCCTCCCATTGGTATTCTTGGGAGCTGTGATATTTCTGAGGTTCCTACAATTGAAGACCTTGGATATGGAGATGCTAAACAGGATGAATTCTCTCCTTTCAAAGGCGGTGAATCGGAAGCGTTGAAGAGGCTGGCAGAATGCATGAAAGACAAGGCATGGGTCGCAACGTTTGAGAAACCAAAGGGTAATCCATCTGCATTTCTTAAGCCCGCAACAACTGTTTTATCACCTTACTTAAAATTTGGTTGTCTTTCCTCCAGATATTTCTACCGGCAGATTCAAGATGTCTATGAAACCATGCCGAAGCATACATCACCACCTGTGTCTCTTCTAGGACAGTTATTGTGGAGAGACTTCTTTTACACAGTAGCTTTTGGAACTCCAAACTTTGATAGGATGAAAGACAACAAGATATGCAAACAGATTCCTTGGAAGGATGATGATAAACTGTTAGAGGCTTGGAGGGATGGTCGCACAGGATTTCCATGGATTGATGCTATCATGGTCCAGCTACGTCAATGGGGTTGGATGCATCATCTGGCACGTCATTGCGTTGCGTGTTTTCTAACTCGAGGTGATCTGTTTGTTCACTGGGAGAGAGGACGTGATGTCTTTGAGAGGCTTCTGATCGATGCAGATTGGGCTATTAATAATGGAAACTGGTTGTGGCTCTCATGTTCTTCCTTCTTTTATCAGTATAATCGTATTTACTCCCCGACATCCTTTGGTAAGAAGTATGACCCTAATGGTGACTACATTAGGCACTTTCTGCCTGTCTTAAAAGATATGCCGAGGCAGTACATATATGAACCATGGAGTGCTCCTCTAAGCATTCAGACCAAAGCAAATTGTATTATTGGCAAAGACTACCCAAAGCCAGTTGTTTTGCATGATTCCGCGAGTAAAGAGTGCAAAAGGAAAATGGGCGAGGCGTATGCACTGAGCAAAGAACTGGATGGTGTTGTTAATGAAGATGATCTGAAAATCTTGAGAAGGAAACTAGATGAGGGTAAAGAACAAGAGACAAAAGCCAAGAGATCTAGAAACACATCTGGTTTAGCCTAG 1614 0.4529 MLSGSGSSVMWFRKGLRIHDNPALQLASQGASHLYPLFVVDPHYMEPDPTSFSPGSSRAGLNRIKFLLESLVDLDLSLKNLGSRLLVLKGDPAEVLIRCLKEWNVRKLCFEYDTEPYYQALDTKVKNFALGAGIEVFSPVSHTLFNPTEIIERNGGKPPLTYQSFTKIAGQPPPPLTITHSSLPPIGILGSCDISEVPTIEDLGYGDAKQDEFSPFKGGESEALKRLAECMKDKAWVATFEKPKGNPSAFLKPATTVLSPYLKFGCLSSRYFYRQIQDVYETMPKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDRMKDNKICKQIPWKDDDKLLEAWRDGRTGFPWIDAIMVQLRQWGWMHHLARHCVACFLTRGDLFVHWERGRDVFERLLIDADWAINNGNWLWLSCSSFFYQYNRIYSPTSFGKKYDPNGDYIRHFLPVLKDMPRQYIYEPWSAPLSIQTKANCIIGKDYPKPVVLHDSASKECKRKMGEAYALSKELDGVVNEDDLKILRRKLDEGKEQETKAKRSRNTSGLA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00262 537 MobiDBLite consensus disorder prediction 515 529 - -
Aip09g00262 537 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 8 499 - -
Aip09g00262 537 MobiDBLite consensus disorder prediction 515 537 - -
Aip09g00262 537 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 311 535 - -
Aip09g00262 537 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 184 IPR036155 -
Aip09g00262 537 CDD USP_Like 23 108 - -
Aip09g00262 537 Gene3D - 142 309 - -
Aip09g00262 537 Pfam DNA photolyase 8 169 IPR006050 -
Aip09g00262 537 Pfam FAD binding domain of DNA photolyase 295 491 IPR005101 -
Aip09g00262 537 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 144 IPR006050 -
Aip09g00262 537 Gene3D HUPs 5 141 IPR014729 -
Aip09g00262 537 PANTHER CRYPTOCHROME 8 499 IPR002081 -
Aip09g00262 537 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 207 495 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00262 Aip-Chr9 2397524 2402274 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00262 K02295 - gmx:100780347 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00262 09 2397524 2402274 Aip09g00262 09 2397524 2402274 ECH