Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00255 ATGAGCAGACCAGGGGACTGGAACTGCAGGTCATGCCAGCATTTGAACTTCCAAAGGCGGGATTCGTGCCAGCGATGCGGCGACTCGAAATACGGCGACAGAGTCGTCGATTTCGGGGGTTTTGGAGGAGGAGGAGGTAGAGGATCTTCATTTGGAATGATGACCGGTTCCGACGTTCGCCCCGGCGACTGGTACTGCGCCGCAGGTAACTGCGGTGCACACAACTTTGCTAGCCGCTCTAGCTGCTTTAAGTGTGGTGCATTCAAGGATGACTTGGCTGGCGCCTTCAACAGCGAATTCTCGCGCTCGAGATACGGCGGTGGCGGTGGCGGCGGCGGCGGTAGACCTGGATGGAAATCCGGTGATTGGATATGTAGCAGATCAGGATGCAATGAACACAACTTTGCTAGCAGACTTGAATGTTTCAAATGCAGTGCTCCAAGGGACTACTAG 453 0.5519 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGGGGRGSSFGMMTGSDVRPGDWYCAAGNCGAHNFASRSSCFKCGAFKDDLAGAFNSEFSRSRYGGGGGGGGGRPGWKSGDWICSRSGCNEHNFASRLECFKCSAPRDY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00255 150 SUPERFAMILY Ran binding protein zinc finger-like 111 149 IPR036443 -
Aip09g00255 150 PANTHER ZINC FINGER PROTEIN 1 149 - -
Aip09g00255 150 Pfam Zn-finger in Ran binding protein and others 119 148 IPR001876 -
Aip09g00255 150 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
Aip09g00255 150 Pfam Zn-finger in Ran binding protein and others 60 87 IPR001876 -
Aip09g00255 150 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Aip09g00255 150 ProSiteProfiles Zinc finger RanBP2 type profile. 119 150 IPR001876 -
Aip09g00255 150 ProSiteProfiles Zinc finger RanBP2 type profile. 60 91 IPR001876 -
Aip09g00255 150 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Aip09g00255 150 Gene3D - 115 149 - -
Aip09g00255 150 Gene3D - 55 91 - -
Aip09g00255 150 Gene3D - 2 32 - -
Aip09g00255 150 SMART zf_4 62 88 IPR001876 -
Aip09g00255 150 SMART zf_4 5 29 IPR001876 -
Aip09g00255 150 SMART zf_4 121 147 IPR001876 -
Aip09g00255 150 ProSitePatterns Zinc finger RanBP2-type signature. 64 85 IPR001876 -
Aip09g00255 150 PANTHER OS02G0203700 PROTEIN 1 149 - -
Aip09g00255 150 SUPERFAMILY Ran binding protein zinc finger-like 57 90 IPR036443 -
Aip09g00255 150 ProSitePatterns Zinc finger RanBP2-type signature. 123 144 IPR001876 -
Aip09g00255 150 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00255 Aip-Chr9 2320104 2321909 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00255 - - adu:107463728 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00255 09 2320104 2321909 Aip09g00255 09 2320104 2321909 ECH