Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00235 ATGGCTTTGGCACGTTTGGCTATGAAGAAGGTTGAAGAAAGGGTGGCTAATTGTTCATCATCACGGAGGTTTGGGAATGAGTTATTAAGAAGGTTTGCAAGTTCATCAGCAAGTGAGAAATCTGAAGGGAGTGAGATAGCTGTGTCATCATCTGGTGGGAGAAGGTCCAGGCTGTTCCCTAGGAGGAGGAGCAGGAGATCATGGCCTTGGAGAAGGAATGAAACTAATGATTTAACTGATTTCACCACCCCTCAACTTTATGAATTCTTCCCTTCAGGGCTTGGAAATGCATTGATGCAAGCAAGTGAGAACATCAACAGGCTATTTGACAACATGAACTTGACACCATGGTCCTTGACCGGCCGGGTTAAGGAGCGCGACGACCACTACAAGCTGCGATACGACATGCCCGGAGTTGTGAAGGAGGATGTGAAAATCACTATTGATGATGGTGTGCTAAAGATAAAGGGTGAACACAAGGAGGAAAAAGAAGAGGAGGATGATGATGAGTATTGGTCTTCAAGTAGCTATGGCTACTATGATACCAATTTGGTTTTGCCTGATGATGCTAAAGCTGATGAGATTAAGGCCGAGTTGAAGGATGGTGTCTTAACTATTACCATTCCTAGGACTCAGCAGCAAAAAAAGGATGTTAAGCAAATTAGTGTCCATTGA 675 0.4415 MALARLAMKKVEERVANCSSSRRFGNELLRRFASSSASEKSEGSEIAVSSSGGRRSRLFPRRRSRRSWPWRRNETNDLTDFTTPQLYEFFPSGLGNALMQASENINRLFDNMNLTPWSLTGRVKERDDHYKLRYDMPGVVKEDVKITIDDGVLKIKGEHKEEKEEEDDDEYWSSSSYGYYDTNLVLPDDAKADEIKAELKDGVLTITIPRTQQQKKDVKQISVH 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00235 224 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 108 224 IPR002068 -
Aip09g00235 224 CDD ACD_sHsps-like 123 210 - -
Aip09g00235 224 Gene3D - 90 223 IPR008978 -
Aip09g00235 224 SUPERFAMILY HSP20-like chaperones 111 223 IPR008978 -
Aip09g00235 224 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 48 224 - -
Aip09g00235 224 Pfam Hsp20/alpha crystallin family 123 224 IPR002068 -
Aip09g00235 224 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 48 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00235 Aip-Chr9 2130741 2132746 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00235 K13993 - gmx:100787482 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00235 09 2130741 2132746 Aip09g00235 09 2130741 2132746 ECH