Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00228 ATGAAGGAAGAGTTTGTTGTGCAAGAAGAGTACGTTTCAGGAGAAGAGAGGAATCTGACGGTGCTGAAAACTTCACGGTTCTTTGCTGGCGATGGCTTCACCGTCTACGATTGCAAGGGCCAACTCGTTTTCCGAGTTGACTCTTACGGTCCCGATGCACGTGACAAGGATGAGCTCGTCCTCATGGATCCACAAGGTCGATGTCTTCTCACCGTAAAACGAAAGAGGCCGAGTCTTCATCAACGGTGGGAAGGTTTCAAAGGAGAAAGAATCGACGGTGATAAAGCATTGTTCAGTATGAAGAGAACATCTTTAATCGGACGGTCACGAGCGAGTGTTATAGTGGAGGTATACGATAAGCCCGGTGTGGAGTATCACATCGAAGGGTGCTTTTCGCAGCGTTGTTGCAAGATCTATAACGCAGCGAAGAAATTAATGGCTGAGATTCGTCGAAAGGTGGACTCCACCACAAGTGTAATGCTTGGGAAAGAAGTCTTCTCGCTTTACGTGAAGCCTGGATTTGATGGTGCACTTGCCATGGGATTGGTCTTGGTCCTTGATCAGATCAACGGTGAGAATTACTTTGAAAGTGGAACCACGGAGTCTCCGGTGCACCCTACTACAGAAGATTAA 633 0.4755 MKEEFVVQEEYVSGEERNLTVLKTSRFFAGDGFTVYDCKGQLVFRVDSYGPDARDKDELVLMDPQGRCLLTVKRKRPSLHQRWEGFKGERIDGDKALFSMKRTSLIGRSRASVIVEVYDKPGVEYHIEGCFSQRCCKIYNAAKKLMAEIRRKVDSTTSVMLGKEVFSLYVKPGFDGALAMGLVLVLDQINGENYFESGTTESPVHPTTED 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00228 210 PANTHER - 15 200 IPR007612 -
Aip09g00228 210 SUPERFAMILY Tubby C-terminal domain-like 5 190 IPR025659 -
Aip09g00228 210 Pfam LURP-one-related 5 185 IPR007612 -
Aip09g00228 210 Gene3D - 4 194 IPR038595 -
Aip09g00228 210 PANTHER LURP-ONE-LIKE PROTEIN 15 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00228 Aip-Chr9 2095115 2096643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00228 - - ahf:112712752 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00228 09 2095115 2096643 Aip09g00228 09 2095115 2096643 ECH
Aip08g00068 08 411440 412090 Aip09g00228 09 2095115 2096643 PCT