Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00227 ATGCTTGGTTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTTCTTGCTTTTCTCTTCCACCAGGGAGTATTGGATGAGCAATTCTTGCAGCTTCAGCAGTTGCAGGATGAGACGTCTCCAAACTTTGTCTCCGAAGTAGTGAACATTTACTTTCATGAATCGGAAAAGCTTCTAAGGAATCTGAGAGGGTTGTTAATGGAAAGAGAGTTTTCAGATTACAAGAAAATGGGAATCCATTTGAATCAATTAATGGGAAGCAGCTCAAGCATTGGCGCCAAGAGAGTCACCAATGTTTGTCTTGCCTTTCGTGCTGCCACTGATCACAGTAACCGTTCTGGATGTTTGCGAGCGCTGGAGATGCTTGAGCATGAATATTGCTATCTCAAGAATAAATTACATGAATTATTCCAAATTGAACAGCAACGTGCATTGGCAGCAGGAGTAAGGTACCCGgtgcagaataattaa 474 0.4283 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLRNLRGLLMEREFSDYKKMGIHLNQLMGSSSSIGAKRVTNVCLAFRAATDHSNRSGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQNN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00227 157 Pfam Hpt domain 47 117 IPR008207 GO:0000160
Aip09g00227 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Aip09g00227 157 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Aip09g00227 157 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Aip09g00227 157 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
Aip09g00227 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00227 Aip-Chr9 2078141 2080342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00227 K14490 - gmx:100789608 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00227 09 2078141 2080342 Aip09g00227 09 2078141 2080342 ECH
Aip08g00067 08 404921 405573 Aip09g00227 09 2078141 2080342 PCT