Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00201 ATGGTTGAAGAGGATTACACAGAGGAAGCTCATGCTGTTGCACACGTGCGGAGGCTGTTGGACATAGTGGCCTGCACAACAAGGTTCGGGAAGCCCAAACGAGGCCCATTAAGCCCAGAATCTAAGCCCAAGAAGAACGCTAAGGCCCAAAATCAGATTAAGGGAGGTTCGAGTCCACCGCCTACACCTAATGGCGAAATCCGTGTCGGATCTCCGCCGGCGCCGGCGGAGCGGGGTATTCCGGCGATATCAGATAGCGTTGGCATGGTGGCGATTCACCCAACGCCGAAGCTTTCAGATTTTTACGAGTTCTTCTCTTTCTCTCACCTCACTCCACCTATTCTACATTTGAAGAAATGTGAGCTGAAAAGTGAAGAAGATAGAAGTAAAGGAGACTACTTTCAGCTTCAGGTTAAAATCTGCAATGGGAAGGTAATAGAAGTGGTGGCTTCAGAGAAAGGGTTTTATACTGTTGGAAAACAATCTCTGCAAAGTCACACTTTGGTTGATCTTCTGCAACAGCTAAGCCGAGGTTTCGCTAATGCATATGAATCTTTAATGAAAGCTTTCTCGGAACATAACAAGTTTGGCAATCTTCCATATGGATTCCGAGCAAATACCTGGCTTGTCCCTCCATCTGTTGCCGAGTCACCTTCAAACTTTCCTGCCCTTCCTGCTCAGGATGAAAGCTGGGGTTGTAATGGTGGTGGCCAAGATAGAAATGGTGAATATGAGCTTAGACAATGGGATTTAGATTTTGCAGTATTGGCTTCTCTTCCATGCAAAACTGAAGAGGAGCGAGTGGTCCGAGATAGAAAAGCTTTCCTGCTGCACAGTCGATTTGTTGATACCTCGATATTCAAGGCCATCAAAGCAATACAGCATGTCATGGAATCCAATATGAAGAATGAATCAAATTCTCCAAGTTCGATTCTGCATGAAGAGCGCGTAGGAGACTTGTCAGTTGTTGTCAAATGTGATATTCGCAACAGAAATGGAAAGTATGATTCTATATCTAATGAATCCAGTCTGCATAAGGAGGATGCTCAGAAGAATTTGCTCAAAGGTTTGACTGCAGATGAAAGTGTAATTGTTCATGATACATCTTCATTAACTTCTGTAGTTGTGCATCATTGTGGATATACTGCAACGGTAAGGGTCGTAGGTAACTTAAATATTAGCAAGCCTAATGCTCACGATATTGAAATAGACGATCAACCAGATGGAGGGGCAAATGCTCTTAACATCAACAGTTTGAGGCTACTGCTTCACAAACATGTAGACGAACCCTCAGAAGGAACTTTATCATCTCCACCAAATTCAGATGACTTAGATAACTCTAAGCAACTTGTCTGGAAGGTAATACAAGATTGCTTGGAAAAGATAACACAGGAGACGGGTGTTTCAAGGAGGTTTTTTAGATGGGAACTTGGTTCCTGTTGGATGCAACATCTGCAGAAACAAGAAAATTCAGCAGATAGTAGTTCCAAAAACAAAGACGACATCAAGGATGTTGAGCAAGCTGTTAAAGGTCTTGGACAGCAATTTAAATTTTTAAAGAGGAGGGAAAAGAAAGAAAGTAATCTCGATGGTTCAGATTCTAGTGAGCAAAATGATTCTAATAAAGTTCAGCAATCCAATGAAGAGTCAAGTAGCTCTGCTGAGTTGGAGAAACTACTTTCCAACGATGCATTTTTGCGTCTTAAAGAATCTGGAACTGGTCTCCATTTAAAGTCAGTGGATGAGCTAATCAGCATGGCACACAAGTATTATGACGAAATTGCTTTGCCAAAGCTGGCTACAGACTTCGGATCACTTGAACTTTCTCCAGTTGATGGTCGTACACTAACTGATTTTATGCATTTAAGAGGACTGCAAATGCGATCTTTGGGTGAAGTGGTTAAACTTGCTGAGAATCTTCCACACATACAATCCCTTTGTATTCATGAGATGATTACTAGAGCCTTTAAGCATCTGCTTAAAGCTGTAATTGCCTCTGTTGACAATGTAGCAGACTTATCTGCCATCATTGCATCAACGCTGAATTTCTTACTCGGAGGATCTCAAACGGAGGATGCTGACCAAAATTTGGCTGATGACCATAATCTCAGATTTAAATGGTTACATATATTTTTGTCCAAAAGATTTGGATGGACACTAAAGGATGAATTTCAACATTTGAGGAAGTTGTCAATTCTCAGAGGGCTCTGTCAAAAGGTAGGATTGGAATTGGTATCAAGAGATTATGACATGGAATCCTCAAAGCCTTTCAGCAAATATGATGTTATCAGCCTAGTTCCTGTGTGCAAGCATGTAGGATGCTCCTCAGTTGACGGACGTAATTTATTGGAATCGTCAAAAATCGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACTAAGGCGCTGGCAAAGATGATGACTGTTTGTGGACCTTATCATCGAACTACGGCTAGTGCATACAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAACCAGGCCACCATATATCAGCAGAAGGCCTTGGACATAAACGAGAGGGAGCTTGGGCTTGATCATCCTGACACAATGAAAAGCTATGGGGATCTTTCGGTCTTTTATTATCGTTTGCAGCACATTGAGCTTGCTCTGAAGTATGTCAACCGTGCTCTATTCCTTCTTCATTTTACGTGTGGGCTTTCCCATCCTAACACAGCTGCGACATATATAAATGTCGCGATGATGGAAGAGGGAATGGGAAATGTCCATGTGGCACTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCTGATCATATACAGACTGCTGCTAGCTATCACGCCATTGCGATAGCACTTTCATTGATGGAAGCATATTCACTGAGTGTGCAACATGAACAAACTACACTCAAGATACTTCAAGCAAAGCTTGGACCTGAAGATCTTCGTACACAGGATGCGGCGGCATGGCTTGAATATTTCGAATCGAAAGCCATAGAGCAGCAAGAAGCGGCTAAAAATGGAACTCCAAAGCCGGATGCATCTATTGCAAGTAAAGGCCACCTTAGTGTGTCAGATCTCATGGATTTCATAAGTCCTGATCAAGACTCAAAAGGAAATGATACTCAGAGGAAACAACGTCGTGCAAAGATAGTCCCACTGAATGATTCCCATCAAGAACATGATGATGGACTAGCAGAGGATGAGGGAATTATTTTTGATGACTCAAAAGATGCTACGAGTATTACAAAGACGGTGGAAGAAAAAAACAGCACAGTTATTGATTCCAAAGAACTAAAAGAAAATAGTGGTCTAACTAGGCATGAGCCAGTGACAAGTGAAGTAGTCTACGAGACATCGTCCGATGAAGGTTGGCAAGAAGCTAATTCAAAAGGGCGGTCTGCAAACCCAGCCAACCGCAAATTTGGACACAGAAAACGTCCTCTTTTGACAAAGGTCAGTATTGATAATTATAATTTTAGAGAAGGCGGTTACAGGAATGACACTCCTTCACCACCAAAGAAGGGATCTCCAAAAGTCACTTTAGCTACTCTGTCTCCATCTAGACAATCGAAAGTTCGCAGCCAGAATTCCAACGAGGATTTTGTTAGTCATCCTACAAAAGCTTCCATGTCCAAAATTTCGTCTCCTCCGCCGTCTCTAAGTTCCTTGGCTTCCAAGTCTATATCATACAAAGAAGTTGCGCTGGCACCACCAGGTACGGTTTTAAAGCCACTGTTGGAGAAAGTTGAGAGGGAAAATAATGAGGCCGAAAATGAGTCATCCACCAGTTCAACTGTGATATCAACAAATGAAGGAACTTGCCAAAGTTCCATAGTTGATTCAGCTTCAAAGCATGATGAAACTCAAGGAACTCATGAAACCGAAATTCAACAAGAAAATTGTTCCTCGGAATCTGAGGTTTCCCCTGTTCCAGATCAGGTAAAACCTACAGAAACTAATGGTAGTAAGCTTTCGGCCGCGGCAAAACCATTCAATCCAGGAATGTTGTCTATGTCAAACCACCATTTAAGCATATATGATGCTAATGTTAGCCAAGGCATGCTTGTTGAGCCTGTTCTTCCTCCTGCTGCTGCTAGAGTTCCTTGTGGTCCAAGATCACCTCTATATTATCGAACCAACTATGCGTTTCGCATGAAGCATGGTTTCACTAAAAGCCATACTCCTATCAGGGAAAGAACATATGGTGCTCCAAGAATCATGAATCCACATGCACCCGAGTTTGTTCCCAGAAATGCTTCTCAATTAGACACTGGCAATGCCAATGTTTCATCCGAAGAAAACAAGGCCGATGAGAAATTCGTCAAAGGCAAAGATAGTTCTCTGAAAAGCAGCATTTCTGAGTCCGAGAAGTCGGAGATAGCAAGGCAGATATTGCTCAGTTTTCTTGTGAAATCTGTTCAGCAGAACATTGATTCTGTGGATGAGTCGAAAGCTAGCGAAGGAAAGCATGAAAAGTCAGAGAACTCTTCTTCTGATGCAATAGCTAAAGACAGTGCTATCATAAAAATCACGTATGGGGATGAAGAAAATAACAAGGTTCCAAATTCCAGTGATAGTGAAGAGCCTGAGGATGTAAGTAGAAAAGTGAATGGAGATGGTGAAGGATTCATAGTTGTAACAAAGAGGAGGAAAAGCAAGCAAAAGATCACAAATGGGGTCACAGAATTGCACAACCAACAATCCATATGTGCTTCAGTTCGTTGA 4740 0.4211 MVEEDYTEEAHAVAHVRRLLDIVACTTRFGKPKRGPLSPESKPKKNAKAQNQIKGGSSPPPTPNGEIRVGSPPAPAERGIPAISDSVGMVAIHPTPKLSDFYEFFSFSHLTPPILHLKKCELKSEEDRSKGDYFQLQVKICNGKVIEVVASEKGFYTVGKQSLQSHTLVDLLQQLSRGFANAYESLMKAFSEHNKFGNLPYGFRANTWLVPPSVAESPSNFPALPAQDESWGCNGGGQDRNGEYELRQWDLDFAVLASLPCKTEEERVVRDRKAFLLHSRFVDTSIFKAIKAIQHVMESNMKNESNSPSSILHEERVGDLSVVVKCDIRNRNGKYDSISNESSLHKEDAQKNLLKGLTADESVIVHDTSSLTSVVVHHCGYTATVRVVGNLNISKPNAHDIEIDDQPDGGANALNINSLRLLLHKHVDEPSEGTLSSPPNSDDLDNSKQLVWKVIQDCLEKITQETGVSRRFFRWELGSCWMQHLQKQENSADSSSKNKDDIKDVEQAVKGLGQQFKFLKRREKKESNLDGSDSSEQNDSNKVQQSNEESSSSAELEKLLSNDAFLRLKESGTGLHLKSVDELISMAHKYYDEIALPKLATDFGSLELSPVDGRTLTDFMHLRGLQMRSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAVIASVDNVADLSAIIASTLNFLLGGSQTEDADQNLADDHNLRFKWLHIFLSKRFGWTLKDEFQHLRKLSILRGLCQKVGLELVSRDYDMESSKPFSKYDVISLVPVCKHVGCSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMTVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGPEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLMDFISPDQDSKGNDTQRKQRRAKIVPLNDSHQEHDDGLAEDEGIIFDDSKDATSITKTVEEKNSTVIDSKELKENSGLTRHEPVTSEVVYETSSDEGWQEANSKGRSANPANRKFGHRKRPLLTKVSIDNYNFREGGYRNDTPSPPKKGSPKVTLATLSPSRQSKVRSQNSNEDFVSHPTKASMSKISSPPPSLSSLASKSISYKEVALAPPGTVLKPLLEKVERENNEAENESSTSSTVISTNEGTCQSSIVDSASKHDETQGTHETEIQQENCSSESEVSPVPDQVKPTETNGSKLSAAAKPFNPGMLSMSNHHLSIYDANVSQGMLVEPVLPPAAARVPCGPRSPLYYRTNYAFRMKHGFTKSHTPIRERTYGAPRIMNPHAPEFVPRNASQLDTGNANVSSEENKADEKFVKGKDSSLKSSISESEKSEIARQILLSFLVKSVQQNIDSVDESKASEGKHEKSENSSSDAIAKDSAIIKITYGDEENNKVPNSSDSEEPEDVSRKVNGDGEGFIVVTKRRKSKQKITNGVTELHNQQSICASVR 1579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00201 1579 SUPERFAMILY TPR-like 787 890 IPR011990 GO:0005515
Aip09g00201 1579 Pfam Tetratricopeptide repeat 904 978 - -
Aip09g00201 1579 Pfam Tetratricopeptide repeat 820 890 - -
Aip09g00201 1579 Gene3D Tetratricopeptide repeat domain 782 895 IPR011990 GO:0005515
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1487 1503 - -
Aip09g00201 1579 Pfam Translation initiation factor eIF3 subunit 135 608 750 IPR033646 -
Aip09g00201 1579 CDD CLU-central 610 751 IPR033646 -
Aip09g00201 1579 ProSiteProfiles TPR repeat profile. 821 854 IPR019734 GO:0005515
Aip09g00201 1579 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1576 IPR027523 GO:0006996
Aip09g00201 1579 MobiDBLite consensus disorder prediction 44 59 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1256 1331 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1299 1331 - -
Aip09g00201 1579 ProSiteProfiles Clueless (Clu) domain profile. 227 496 IPR025697 -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1104 1229 - -
Aip09g00201 1579 Coils Coil 1251 1271 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1185 1229 - -
Aip09g00201 1579 Gene3D Tetratricopeptide repeat domain 896 1014 IPR011990 GO:0005515
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1042 1074 - -
Aip09g00201 1579 SMART tpr_5 821 854 IPR019734 GO:0005515
Aip09g00201 1579 SMART tpr_5 905 938 IPR019734 GO:0005515
Aip09g00201 1579 SMART tpr_5 863 896 IPR019734 GO:0005515
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1437 1459 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1420 1459 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 30 80 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1525 1542 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 533 554 - -
Aip09g00201 1579 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1576 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1486 1544 - -
Aip09g00201 1579 SUPERFAMILY TPR-like 858 982 IPR011990 GO:0005515
Aip09g00201 1579 Coils Coil 502 522 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1112 1140 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1033 1074 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 523 554 - -
Aip09g00201 1579 MobiDBLite consensus disorder prediction 1263 1289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00201 Aip-Chr9 1786936 1799577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00201 K03255 - gmx:100801625 2305.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00201 09 1786936 1799577 Aip09g00201 09 1786936 1799577 ECH