Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00192 ATGGGGGGAGCGTGTTCTAGGAAGCCCGAGCGGGATTCTGAAGATAGTCCATGTAGAGGACTTTCACGAAGATTTTGCAAAAGTGGGAGTTTGAAATGGTGGACATCCTCGTTCGCTTATCCTTCTGTAGATTTCCATTTACGGAAAGGAGATTGTCCATCGCTGTTGGAGTTGTGCATCAAGAAAATAAATGAGGATATTGACAGATATAATTCATTTTCTATGCTGCCTCGGGATATAAGTCAGCAAATTTTTAATAAATTGGTTTGTTCCCAACGCCTAACCAGCGTTTCCCTTGAAGCTTTTCGAGATTGTGCGCTTCAGGACCTTGACTTGGGTGAATATGCCGGTGTTAATGATTCTTGGATGGATGTCATCTCATCACAGGGTTCATCATTACTTTCCGTGGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGAGTTACCTAAAATATTGTGAAAATCTCCTTTCCTTAAATCTAAATTACTGTGATCAAATCTCGGATCATGGACTGGAGTGCATCAGTGGTCTGTCAAACTTGACAAGTTTGAGCCTCAGAAGAAATGATTCAATATCTGCTCAAGGAATGAGTATCTTGTCTGGTCTTGTTAATTTAGTCAAGTTGGACTTGGAGAGATGTCCTGGGATTCATGGAGGCCTGGTTCACATTCAAGGTTTAACCAAGTTGCAATCACTCAATATTAAATGGTGCAATTGCATAACCGATTCTGATATGAAGCCTCTATCAGAGTTGGTGTGTTTGGAGAGTCTTGAGATTTCTTGCAGTAAAGTCACTAATTTTGGCATCAGCTTTCTAAAAGGATTGCAAAAGCTTTCCTTACTAAACTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGATCTTCCTCTCTTGTCAAACTTGAATCTTAATAGATGCAATATTACCGACGACGGCTGTGAAAAGTTTTCACGGCTGGAAAATTTGAAAGTACTCAACTTGGGATTTAATGATATTACTGATGCATGTTTAGCACACTTGAAAGTATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAGGATTGGTGATGAAGGGTTGATCAACTTGGCAGGCCATAGGCAACTGAAGTGCTTGGTATTGTCTGATACAGAAGTTGGAGATACTGGGTTACACCATTTGTCAGGATTGTCTGGCCTGGAGAAAATAAATCTGTCATTCACTGTGGTTAGTGATAGTGGTTTAAGGAAACTGTGTGGACTCACATCTCTTAAGTCACTTAATTTGGATGCTCACCAAATTACTGATGCTGGACTGGCAGCCCTTACAAGTTTGACTGGGCTTACTGACCTTGATTTATTCGGTGCCCGAATCACAGATTATGGAACAAATTATCTGAGAAAATTTAAGAACCTGAGGTCCTTGGAGATATGTGGTGGAGGATTGACTGATGCCGGTGTGAAAAATATTAGAGCGCTTTCTTGTCTTATGTGCCTAAACTTATCACAAAACTGCAACCTTACGGACAAAAGCCTGGAGTCAATTTCAGGGCTTACTCGATTAATCTCTTTGAATGTTTCAAATTCTCGCATCACCAACTCTGGTCTGCAGCATTTGAGAACACTGAAGAACTTGAGGTCTCTGACATTGGAATCCTGCAAGGTGACAGCATATGACATAAAGAAACTAAGATCAACACACCTCCCGAATCTGGTCAGCTTCCGGCCAGAATAG 1734 0.4123 MGGACSRKPERDSEDSPCRGLSRRFCKSGSLKWWTSSFAYPSVDFHLRKGDCPSLLELCIKKINEDIDRYNSFSMLPRDISQQIFNKLVCSQRLTSVSLEAFRDCALQDLDLGEYAGVNDSWMDVISSQGSSLLSVDLSGSDVTDFGLSYLKYCENLLSLNLNYCDQISDHGLECISGLSNLTSLSLRRNDSISAQGMSILSGLVNLVKLDLERCPGIHGGLVHIQGLTKLQSLNIKWCNCITDSDMKPLSELVCLESLEISCSKVTNFGISFLKGLQKLSLLNLEGCLVTAACLDSLADLPLLSNLNLNRCNITDDGCEKFSRLENLKVLNLGFNDITDACLAHLKVLTKLESLNLDSCRIGDEGLINLAGHRQLKCLVLSDTEVGDTGLHHLSGLSGLEKINLSFTVVSDSGLRKLCGLTSLKSLNLDAHQITDAGLAALTSLTGLTDLDLFGARITDYGTNYLRKFKNLRSLEICGGGLTDAGVKNIRALSCLMCLNLSQNCNLTDKSLESISGLTRLISLNVSNSRITNSGLQHLRTLKNLRSLTLESCKVTAYDIKKLRSTHLPNLVSFRPE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00192 577 SMART LRR_CC_2 180 204 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 422 445 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 228 253 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 469 493 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 154 179 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 518 542 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 349 373 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 397 421 IPR006553 -
Aip09g00192 577 SMART LRR_CC_2 301 325 IPR006553 -
Aip09g00192 577 ProSiteProfiles Leucine-rich repeat profile. 327 347 IPR001611 GO:0005515
Aip09g00192 577 SUPERFAMILY RNI-like 127 438 - -
Aip09g00192 577 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Aip09g00192 577 Pfam Leucine rich repeat 303 362 IPR001611 GO:0005515
Aip09g00192 577 PANTHER UNCHARACTERIZED 2 534 - -
Aip09g00192 577 SUPERFAMILY RNI-like 394 572 - -
Aip09g00192 577 Gene3D Ribonuclease Inhibitor 398 479 IPR032675 -
Aip09g00192 577 Gene3D Ribonuclease Inhibitor 299 388 IPR032675 -
Aip09g00192 577 Gene3D Ribonuclease Inhibitor 60 219 IPR032675 -
Aip09g00192 577 Gene3D Ribonuclease Inhibitor 480 573 IPR032675 -
Aip09g00192 577 Gene3D Ribonuclease Inhibitor 220 298 IPR032675 -
Aip09g00192 577 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Aip09g00192 577 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Aip09g00192 577 Pfam Leucine Rich repeat 180 199 IPR001611 GO:0005515
Aip09g00192 577 Pfam Leucine Rich repeat 422 442 IPR001611 GO:0005515
Aip09g00192 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00192 Aip-Chr9 1673107 1680176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00192 98 504 Receptor kinase-like Gene Family AT2G15080 25.874 2.69e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00192 - - gmx:100800666 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00192 09 1673107 1680176 Aip09g00192 09 1673107 1680176 ECH