Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00180 ATGGCCCTTCTTCTTCTTCTTCAACTCAGGACCAAACCCAACAACAACCCTTTCACAAACCCCGCTTTGTTCTTTTTATTCTCCAAATCTTCTTCTTCTTCTTCTCTCAGAGACCTAAAACACACTCTCAAACACCAACAATCAGAATCACAATCACAATCACAATCACAATATCCTTCAACACCCTCAGAGCAATCCTCCTCATTCACCAACACTCATTATCATCAGCAGCAACAGCAACAGCAACATCAGCAACAACAGAAGAACTCTCTCCACGATATCCGTGGCACCCTCTCCGAGTTCCGCCGCCGCACCGCCGCCGAAACTCTGCCGGACGAATCGCTTTCATTCAGTGATATCTACGACCGAACCGTGCGCCGGAAAACGCCCTTTCCGGACATGGAATCCTCCGGTACGGCGCACGGCGGAGGGAGGAGACCTTTCAACCTCGGTGCCGTTCGCGATGACTTGCGGAAGCCAGGAGAGGCTCGCGCCAGAGACCGGAGGAGAGCTGATTCGTTTTCGTTGGAGGCGTACAGGGAGGTGCTGAGATCGAGGCCGTTAGATTCCTCCGCCACCGCGGCAGCTGGAGCATCCTCGCCGGAGAATGTGGTTGGCACTGCGAGCTGGTTGCCGGATTCTGTGTTGAAGCAGAAGAGACGCAAGGAAGAATCCGAGTTTATGAAGGTTTATAGCTTTGGCGAATTGGGGGAGAAATTGAAGAAGCTGAGACCCGAGGGAATGAGAAAAGAGTGGTTCTCTATTGAAGAATTGAACGAAAGGTTGAAGAGGATGAGAGAGAAGGAGGTGGAGGAAGCTGAGTCCAATGTCACAGGAGGGGTATTATTCAAGGACATGAGAGAGTGCCTGGTATCTGAAGATGAAAAGTCTAGGAAGAGTTCACTGCAGAAATCTGATATCTTAAGCCAGTTGATTGGGACTCCAGCCTACTATTCGGATCCCCGTAAAGAGCATCTTGTTGAAAAATACTTCCATCCAGATAATATGTCCTCAGAAGAAAAGTTGAAAATTGAACTTGCAAAGGTTAGAGATGAGTTCAAAATGTCAGAATCAGACTGTGGATCTGCTCGAGTTCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCAGCTGTTCTACACAAGAAGGATGTGCATTCTCGTAAAGGCTTGATCGCAATGGTCTACGTGATAATCCAGATCATGGTCGCAAAACATAGGCCAGAGGTAGATCAAGTCATGCAATCAGTTCATATGGTCATTCTTCTGGTAGACCAGGGAGAAATACTTCTATGA 1299 0.4781 MALLLLLQLRTKPNNNPFTNPALFFLFSKSSSSSSLRDLKHTLKHQQSESQSQSQSQYPSTPSEQSSSFTNTHYHQQQQQQQHQQQQKNSLHDIRGTLSEFRRRTAAETLPDESLSFSDIYDRTVRRKTPFPDMESSGTAHGGGRRPFNLGAVRDDLRKPGEARARDRRRADSFSLEAYREVLRSRPLDSSATAAAGASSPENVVGTASWLPDSVLKQKRRKEESEFMKVYSFGELGEKLKKLRPEGMRKEWFSIEELNERLKRMREKEVEEAESNVTGGVLFKDMRECLVSEDEKSRKSSLQKSDILSQLIGTPAYYSDPRKEHLVEKYFHPDNMSSEEKLKIELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSAVLHKKDVHSRKGLIAMVYVIIQIMVAKHRPEVDQVMQSVHMVILLVDQGEILL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00180 432 Pfam Ribosomal protein S15 348 396 IPR000589 GO:0003735|GO:0005840|GO:0006412
Aip09g00180 432 Gene3D - 340 389 - -
Aip09g00180 432 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 396 - -
Aip09g00180 432 MobiDBLite consensus disorder prediction 46 90 - -
Aip09g00180 432 Coils Coil 255 275 - -
Aip09g00180 432 SUPERFAMILY S15/NS1 RNA-binding domain 346 396 IPR009068 -
Aip09g00180 432 SMART Ribosomal_S15_2 346 421 IPR000589 GO:0003735|GO:0005840|GO:0006412
Aip09g00180 432 MobiDBLite consensus disorder prediction 37 90 - -
Aip09g00180 432 MobiDBLite consensus disorder prediction 128 152 - -
Aip09g00180 432 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00180 Aip-Chr9 1504813 1508006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00180 - - ahf:112709767 650.203