Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00171 ATGGCAGAGATCAAGATGAAGGCATCAGTGAATTTTCCTGATGAATGCTGGGAATCAATCTTCAGATTCCTAGGCCACGGCCGAGACTTGGAATCGGTTTCCATGGTCTGCAAGAGGTTCCTCACAATTTCAAGCCAGCTTCAAGATTCCCTCACAATATTTGATGCAACAACAATGCTCATTCCAAAGCTGTTCTTGAGATTCTCAAGGCTCAAAGTCTTAGACCTCAGTTACTTCAATGGGAACCTCGAAGGCCTGCTTTGTCAGGTTTCACAATCCACCTTGGACCTTGATACCCTTAACCTTTCCAATCAGAGGACACTCCCCATTGATTTGTTCCGGGACATCGGCTCGAAGATGAAGAACTTAAGGGTGTTGATTTGTTCAAACATTGGCTCTCTTTGGGATAGCCATTTGATGATCATGGCCTATTGTTTCCCATTGCTTCAAGAGCTTGACATCAGCTTCCCATTGATTTCAGAAGCAACAGATTTTGGGATCTCAAAGTTGTCTTTGTTGCTCGAGCGCCTTCGCAAGATTAACTTCTCTGGAAACTACTTAGTCACTGATCAATCACTGGTAGCTCTGTGTCAGAACTGTATGACAATTGAAGACATTTCCTTCTTCAATTGTTTTAAGATAACTCAAGGAGGCATTGCTAATGCTATCAATTTCAGACCAACCTTGGCTTCCATAGCATTCAACATTAAGAAAAGAAGAATTCATGGACGTGGCTTGGCACCTATGCCAATTAACTTGGATTTGATTGATTCACTCAAGAGTTTGAAAAGCTTAACTTGTATTGATTTGTCGAATTCTTTTATCTCGGATGAGTTGCTCTTTTCTGTTGCAGAATGTTGTCATTCCATAAAGAAACTCATCCTCCAAGACTGCTGCAATTTCACATTTTCAGGAATATATTCTGTGGTATCAAATTGTCCATTAATACAATGCTTGGATCTTAGAAAAACCGACTTCCTAACCGATCATTGTATTGGCAAGCTATCAATGTTTCTTCTCAATTTAACCTCTATAAACCTCAGTGGTTGTGATCAGCTTACCAATTCAACATTTTACACACTGACAAGAGGTTGTCCTAAACTTGTTGAGATTAAAATGGACAGAACATATCTTGGAGAAGTAGGGGAAGATTCAGATTCTTCTCTTGTTCCGGTTCAGAACACTCAAGTGAAAAGTCTCTATCTGGGTCAAAATATTTTACTTGGTGATCAAAGTTTGATGAAAATGGCTTCTATTTGCCCCAATGTAGAGCTTCTCGACTTAAACTCTTGCGGCAGCATATCGGGAGAATGTGTCGTGAACGTTCTCCGGAAATGCCGAGAGATAAGGCACTTAGGCTTAGCCAATACAGGAGTGAAGCTGTTGAAGATGGACTTTAAAGTTTTGCAACTGAAGGTATTGAACTTGTCAGGATCAAGAATCAATGATGAAGCACTCTCCATAATCTCAAAATGTTGTTGTGGACTAGTAGTTCTGGATATTCAAGGTTGCAACAATGTTACCACAAAAGGGGTGAAAGAAGTGGTAGAAAGCTGCATGGAGTTGAGAGAGCTGAATTTGAAGAACTGTGATTTTGTAAATGATAATTTTGTTGCTGCCTTAGAACTTATAAGGCCATCATTGAGGAGAATAATCACAAACTCTTATGTTGGTGTTTGA 1680 0.3994 MAEIKMKASVNFPDECWESIFRFLGHGRDLESVSMVCKRFLTISSQLQDSLTIFDATTMLIPKLFLRFSRLKVLDLSYFNGNLEGLLCQVSQSTLDLDTLNLSNQRTLPIDLFRDIGSKMKNLRVLICSNIGSLWDSHLMIMAYCFPLLQELDISFPLISEATDFGISKLSLLLERLRKINFSGNYLVTDQSLVALCQNCMTIEDISFFNCFKITQGGIANAINFRPTLASIAFNIKKRRIHGRGLAPMPINLDLIDSLKSLKSLTCIDLSNSFISDELLFSVAECCHSIKKLILQDCCNFTFSGIYSVVSNCPLIQCLDLRKTDFLTDHCIGKLSMFLLNLTSINLSGCDQLTNSTFYTLTRGCPKLVEIKMDRTYLGEVGEDSDSSLVPVQNTQVKSLYLGQNILLGDQSLMKMASICPNVELLDLNSCGSISGECVVNVLRKCREIRHLGLANTGVKLLKMDFKVLQLKVLNLSGSRINDEALSIISKCCCGLVVLDIQGCNNVTTKGVKEVVESCMELRELNLKNCDFVNDNFVAALELIRPSLRRIITNSYVGV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00171 559 PANTHER NODULIN-LIKE PROTEIN 325 545 - -
Aip09g00171 559 PANTHER NODULIN-LIKE PROTEIN 6 236 - -
Aip09g00171 559 PANTHER NODULIN-LIKE PROTEIN 225 320 - -
Aip09g00171 559 SMART LRR_CC_2 519 544 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 313 335 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 468 492 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 262 286 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 394 419 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 339 364 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 174 199 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 493 518 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 287 312 IPR006553 -
Aip09g00171 559 SMART LRR_CC_2 420 445 IPR006553 -
Aip09g00171 559 Gene3D Ribonuclease Inhibitor 246 381 IPR032675 -
Aip09g00171 559 Gene3D Ribonuclease Inhibitor 5 241 IPR032675 -
Aip09g00171 559 SUPERFAMILY RNI-like 60 215 - -
Aip09g00171 559 SUPERFAMILY F-box domain 10 46 IPR036047 GO:0005515
Aip09g00171 559 SUPERFAMILY RNI-like 254 543 - -
Aip09g00171 559 PANTHER UNCHARACTERIZED 225 320 - -
Aip09g00171 559 PANTHER UNCHARACTERIZED 325 545 - -
Aip09g00171 559 PANTHER UNCHARACTERIZED 6 236 - -
Aip09g00171 559 Gene3D Ribonuclease Inhibitor 384 460 IPR032675 -
Aip09g00171 559 Gene3D Ribonuclease Inhibitor 461 556 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00171 Aip-Chr9 1451450 1453148 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00171 K10268 - gmx:100811565 706.442