Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00170 ATGATTCCATCATCAAGATGTTGCAGACACCAAGAGCCACATTTACCAGATGAGTGTTGGGAATTAGTTTTCAAACACCTCAGCGACCCTCTCGATCACGAATCACTCTCCCTCGTCTCGCGCCACTTCCTTTCCCTCACCAACGGCATCCACACCAACCTCGACGTATCCGACCGTGTCCTCCCTCTCCTCCCCGTCCTCCTCCGCCGTTTTCCCAACCTCACGACCATCAAAATCACGCGCTGCTTCACCGGTGACATCAACGTGCTCCTCTCCCAAATCGCTTCCTTCAACCTACCCTCACTCCATTCTCTCGACCTGTCTCACCAACTCACCTTCCCCACACATGGGTTGCGACAATTCTCCCAAAAGTTTTCAGCTTTGAAGTCACTCAACTGTTCCCACACCCGTCATGATTTGGATGTAATTGCCGAATGCTTCCCAAACCTCGAAGAAATCGATGTGAGTTTCCGTAGATATAAAATTGATATTGTTTCGGATTGGGTAAAGGCCTTGACTTTAGGGTTTAAGAAGCTTAGGAAGGTGACTATTTCAGGCATTGCCAATGCGATTCGTAAGAGACCCGAATTGAGGTCTTTGGCGGTTAACTGTTTGACTTATGGGTTTTTTAGTGAGGACCTTAGAAAGGGGAATGTGACTTGGGATTTCATTGATGCATTGGTGAGTTTAAAGGGTTTGAATTGTCTTGATTTATCCTATTCGAGTATATCTGACCAGGCTTTGTGTGTTCTTGCTGAAGAAAGCCTTCCATTGAAGAAACTCTCCCTGAGATGTTGTAAGGGATATGGATATGGTGGGATCTCTTATTTGTTGAAGAAGTGTAACAATTTGCAGTATTTGGATCTTCAAAGAGCGGGGTTTCTGAATGATCAGTGTGTGGTTGAGTTGTCTTTACTTCTTAGTAACTTGAAGTTTGTGAAACTTAGTGATAATGCAAAGCTTACTGATTTAAGCTTGTTAGCCATTATGCGAAACTGTCCTTTGATAACCGATATCAGGATGGAGAGTACAGGCATTGGAAAGCAGAAGCTGCAGGAAGAAGAAGATTGTTTGATTGTGAATTCTCAAGTGAAGTTTCTCTATTTGGCTAGCAATACGTGGTTGGATGATGGAACTGTCACTATGCTTGCTGCGGTTTGCCCCAACTTGGAGATGATAGATTTGAGCAAATGCGGAAGGGTTTCAAAAAGTGCTATTGATGTTTTGTGGAGCTGTCGTAAGATTCAGCGCATGGACTTAGCTCTGTTAGGACATGAGCTGTTTCAATTTCGGTTTCGGGTTTGCTTCGATGTTCCTACATTGTTTGTGTTGAATTTGTCCCAGTTGAGTATTTGCAACGAGGAGCTCTCTCTTATTTCAAAGAGTTGTTGTAAGTTAAAAGAACTTGATTTGGCAAGTTGTCACAAAATCACTACCCGAGGAGTAAAGCAGGTGGTGAAAAATTGCAAGCAACTAAGAACGATAAGTTTAGCATCTTGTGAAAAAGTATCTCCTAATGTCGTTGCTTGGATGGTATCTGCAAGGCCATCGTTGAGAAAAATAAGACCTCCGCCTCGATTTTTTCCTACCGAGTGCCAGAGGGATCTCTTCCGGCGTCATGGATGCTTTGTTGGCAAGTGGTCTGATTAA 1650 0.4376 MIPSSRCCRHQEPHLPDECWELVFKHLSDPLDHESLSLVSRHFLSLTNGIHTNLDVSDRVLPLLPVLLRRFPNLTTIKITRCFTGDINVLLSQIASFNLPSLHSLDLSHQLTFPTHGLRQFSQKFSALKSLNCSHTRHDLDVIAECFPNLEEIDVSFRRYKIDIVSDWVKALTLGFKKLRKVTISGIANAIRKRPELRSLAVNCLTYGFFSEDLRKGNVTWDFIDALVSLKGLNCLDLSYSSISDQALCVLAEESLPLKKLSLRCCKGYGYGGISYLLKKCNNLQYLDLQRAGFLNDQCVVELSLLLSNLKFVKLSDNAKLTDLSLLAIMRNCPLITDIRMESTGIGKQKLQEEEDCLIVNSQVKFLYLASNTWLDDGTVTMLAAVCPNLEMIDLSKCGRVSKSAIDVLWSCRKIQRMDLALLGHELFQFRFRVCFDVPTLFVLNLSQLSICNEELSLISKSCCKLKELDLASCHKITTRGVKQVVKNCKQLRTISLASCEKVSPNVVAWMVSARPSLRKIRPPPRFFPTECQRDLFRRHGCFVGKWSD 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00170 549 Gene3D Ribonuclease Inhibitor 358 428 IPR032675 -
Aip09g00170 549 SUPERFAMILY RNI-like 64 204 - -
Aip09g00170 549 Gene3D Ribonuclease Inhibitor 52 206 IPR032675 -
Aip09g00170 549 SUPERFAMILY F-box domain 14 48 IPR036047 GO:0005515
Aip09g00170 549 Pfam F-box domain 14 50 IPR001810 GO:0005515
Aip09g00170 549 Pfam Leucine Rich repeat 462 483 IPR001611 GO:0005515
Aip09g00170 549 Gene3D Ribonuclease Inhibitor 211 357 IPR032675 -
Aip09g00170 549 PANTHER UNCHARACTERIZED 12 299 - -
Aip09g00170 549 PANTHER UNCHARACTERIZED 372 515 - -
Aip09g00170 549 PANTHER NODULIN-LIKE PROTEIN 12 299 - -
Aip09g00170 549 PANTHER NODULIN-LIKE PROTEIN 372 515 - -
Aip09g00170 549 Gene3D - 3 48 - -
Aip09g00170 549 SUPERFAMILY RNI-like 221 519 - -
Aip09g00170 549 SMART LRR_CC_2 463 488 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 281 306 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 255 280 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 307 332 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 230 254 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 99 124 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 489 514 IPR006553 -
Aip09g00170 549 SMART LRR_CC_2 387 412 IPR006553 -
Aip09g00170 549 Gene3D Ribonuclease Inhibitor 429 522 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00170 Aip-Chr9 1448111 1449862 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00170 K10268 - gmx:100819538 419.083