Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00154 ATGGACTACAGCTCTGAGGATGAATCGGATATTAGTGAGTCTGAGATTGACGACTATTCAGAGAAACCATATGAACAGATAAGGAGTGGAAAGTACAAGGTTAAAGCCTTAAATGGGACTCTTAGATGTCCTTTCTGTGCTGGGAAGAAGAAACAAGAGTATAAATACAAGGAATTGTACCAACACGCGTCAGGCGTGGCTAAGGGTTCTGCTAACAGAAGTGCGAAACAGAAGGCGAACCACCTTGCTCTGTGGAAGTACATGGACAATGAGCTAGCCAGCGAGGCAGACGAAGTCCAGCGTCCGCCTGCACCTCAAGCTGTCAATCAACCTCCGCAGCAAGATGAGTTGTATGTTTGGCCCTGGACGGGTATTCTTGTTAACATAAAGAGTAAAGCACAGGATTCTGGATATTGGTTGAAGGAATTTGCAAAATACAGACCATTAAATGTTAAAATATTCTTGAATGAAGGTGATACGGTTTCTCAAGCTGTAGTGGACTTCAATAATGACTGGAACGGTTTCATGAATGCAAGTGCATTTGAGAAATCATTTGAAACTGCACGTCGTGGTAAAAAGGATTGGAGTTCAAACAAGTTGCAAGCAGACACAAACATTTATGGATGGGTAGCACGGGAAGATGATTATGGTTGTGAAGGACTGATAGGGGATTACCTACGCAATAAAGGAAGGTTGAGGACAGTTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGTATTGTGGCAAACCTGGCCAATGAGCTTGATATTACAAATGAAAACATCAACAAAATGGTATACAAATTCAATGAGAAGAATTTGTCCTTGAGCAGGATGCTTGTGGAGAAAGACCAACTTCACAATGCTTTTGTTGAAGAATCAAGGAAAATGCAACGTCTTGCCCGTATTGAGGTAAGGAGGATATTGGAAGAACAAGAAAAGTTGAGCAGTGAGTTGGAGGCAAAAAAACGAAAGCTAGATTCCTGGAGCAGAGATCTAAACAAACGTGAGGTACTGACTGATCAAGAGAGGCAGAAACTCGAAGAGGAAAAGAAGAAGAAAGATTTGAGGAATGAATCACTTATGATGGCATCAAAGGAGCAGAAGATAGCTGATGAGAAAGTTTACACACTTGTTGAGGAGCAAAAGAGAGAGAAAGAGGAGGCATTGAATAAGATACTTCTGTTGAAAAAACAACTAGATGCCAAACAGAAGTTGGAAATGGATATTGAAGAGTTAAAAGGGAAGTTGCAGGTCATGAGGCATCTTGGAGATGCAGATGATGCAGCAATTCAGAAAAAGATGAAGGAAATGAGTGATGAATTGCAAGAGAAAGTAGAAAATTTGGACAGTATGGAGTCCATGAACCAAACACTCATTATCAAGGAGCGCCAGAGCAATGATGAGCTGCAACAAGCTCGTAAAGCATTGATAAATGGGTTAGAAGATATTCTGAATTCTTCTTCACGAACTAATATTGGGATCAAGAAAATGGGAGAACTTGATGAGAAGCCTTTTCTCAATGTCTTCATGAAACAAAAAAGTCTTCGTGAAGAAGAAGCTCAGACAAAGGGTTTGGAGCTTTGCTCTTTTTGGCAGGAGAACTTGAAGGATTCGAACTGGCATCCATTCAAAGTGGTCACGGTTGATGATAATCCACAGGAAATTCTGAATGAGGATGATGAGAAGTTAAAAAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATTACTTCCATCAAAGAACTCAATGAGTACAATCCAAGCGGTAGATATATTGTTAAGGAGCTATGGAACTTCAAGGAAAAAAGGAAGGCTACCTTGAAGGAGGTGATCAGCTACATTGTAGTTAATCATATCAAACATCTTAAGCGCAAGAGAACATAA 1917 0.3912 MDYSSEDESDISESEIDDYSEKPYEQIRSGKYKVKALNGTLRCPFCAGKKKQEYKYKELYQHASGVAKGSANRSAKQKANHLALWKYMDNELASEADEVQRPPAPQAVNQPPQQDELYVWPWTGILVNIKSKAQDSGYWLKEFAKYRPLNVKIFLNEGDTVSQAVVDFNNDWNGFMNASAFEKSFETARRGKKDWSSNKLQADTNIYGWVAREDDYGCEGLIGDYLRNKGRLRTVSDIVQEASESRNSIVANLANELDITNENINKMVYKFNEKNLSLSRMLVEKDQLHNAFVEESRKMQRLARIEVRRILEEQEKLSSELEAKKRKLDSWSRDLNKREVLTDQERQKLEEEKKKKDLRNESLMMASKEQKIADEKVYTLVEEQKREKEEALNKILLLKKQLDAKQKLEMDIEELKGKLQVMRHLGDADDAAIQKKMKEMSDELQEKVENLDSMESMNQTLIIKERQSNDELQQARKALINGLEDILNSSSRTNIGIKKMGELDEKPFLNVFMKQKSLREEEAQTKGLELCSFWQENLKDSNWHPFKVVTVDDNPQEILNEDDEKLKSXXXXXXXXXXXXXXXXXVITSIKELNEYNPSGRYIVKELWNFKEKRKATLKEVISYIVVNHIKHLKRKRT 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00154 638 MobiDBLite consensus disorder prediction 1 15 - -
Aip09g00154 638 Coils Coil 559 568 - -
Aip09g00154 638 Coils Coil 381 425 - -
Aip09g00154 638 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g00154 638 Pfam XH domain 498 636 IPR005379 -
Aip09g00154 638 Coils Coil 434 457 - -
Aip09g00154 638 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 638 - -
Aip09g00154 638 PANTHER RIBONUCLEASE P SUBUNIT P38 4 638 IPR045177 GO:0080188
Aip09g00154 638 Coils Coil 341 366 - -
Aip09g00154 638 Pfam XS zinc finger domain 43 84 IPR005381 GO:0031047
Aip09g00154 638 Gene3D XS domain 112 271 IPR038588 -
Aip09g00154 638 Coils Coil 307 334 - -
Aip09g00154 638 Pfam XS domain 115 216 IPR005380 GO:0031047
Aip09g00154 638 CDD RRM_like_XS 118 216 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00154 Aip-Chr9 1280334 1285952 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00154 - - gmx:100798940 908.286