Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00143 ATGTCGGGTCCACCGAGAGTCCGATCCATGAATGTGGCTGCCGCCGGCGACTCTGAGCTCCGGCAAGTGCTCGTCCCCGCCTGCAACAAGGCTCGTGCCGCCAGCGACGGGAGGAAACCTGTGAAAAAGCCTTCGCCAGAGACTGTGTCAAAGGAGAAGAAGCCTTCGCCGGCGGCGGCACCGGCAATTCTGAAGCGGCAGGAGCGCCACCATCAGGCACTGCTGAAGAACCTGTCAATGAATGCCTCTTGTTCATCCGATGCCTCGTCGACGGATTCCTCCACTCACAGCGGGGCTTCATCGAGCGGAAAGGCTGCGGCCGTGGCGGCGCGTCGGGTCAGTGTGGTGGCTAGGAAGAAGCAGGGTAGTGTCAAGGCTGAGAAGGTTGAGAAGGTCAACAATTGCAGTGTGGCTGCTGCTTCTGATAATGGTGCTGAGGTGGATTCATGTGATAGCTTGGAGGGCAAGAAAAGATGTGCTTGGGTAACACCAAATACAGAACCAAGTTATGTTGCTTTTCATGACGAAGAGTGGGGAGTTCCTGTTCATGATGACAAGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCTGAACTTACATGGCCTGCCATTCTTAGCAAAAGGCAGTTATTTCGTGAAGTCTTTTTGGATTTTGATCCAAGTTCTGTCTCAAAACTGAATGAGAAAAAGATAGTTGCACCAGGAAGCACTGCCAGCTCATTGCTGTCCGATCTCAGGTTGCGATCGATAATTGAAAATGCACGCCAGATTAGTAAGCTAATTGAAGAGTTTGGTTCCTTTGACACATTTATTTGGAACTTTGTGAACCACAAGCCAATAGTCAGCCAGTTCAGGTATCCGCGCCAAGTACCAGTCAAATCTCCAAAAGCCGAAGTCATAAGTAAAGAACTTGTAAGGAGAGGGTTCCGGAGTGTGGGTCCGACGGTCATTTATACATTCATGCAAGTAGCTGGACTAACAAATGACCACCTAATCAGTTGCTTCAGATTCAAGGAGTGTGCCTTAAACTCGGAACCAGTCTGCAAAGAAAGCTCCTTCAACTCCAAGGTCAAGGAAAAAGCAAACGACGAATCAACGGAGACAGGTCTATTGCTAGCCGTGAACAAGTTGAGCTTCACCTGA 1149 0.5004 MSGPPRVRSMNVAAAGDSELRQVLVPACNKARAASDGRKPVKKPSPETVSKEKKPSPAAAPAILKRQERHHQALLKNLSMNASCSSDASSTDSSTHSGASSSGKAAAVAARRVSVVARKKQGSVKAEKVEKVNNCSVAAASDNGAEVDSCDSLEGKKRCAWVTPNTEPSYVAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPAILSKRQLFREVFLDFDPSSVSKLNEKKIVAPGSTASSLLSDLRLRSIIENARQISKLIEEFGSFDTFIWNFVNHKPIVSQFRYPRQVPVKSPKAEVISKELVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECALNSEPVCKESSFNSKVKEKANDESTETGLLLAVNKLSFT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00143 382 SUPERFAMILY DNA-glycosylase 157 342 IPR011257 GO:0003824|GO:0006281
Aip09g00143 382 PANTHER OS04G0501200 PROTEIN 1 382 - -
Aip09g00143 382 MobiDBLite consensus disorder prediction 83 102 - -
Aip09g00143 382 Gene3D Hypothetical protein; domain 2 156 339 - -
Aip09g00143 382 MobiDBLite consensus disorder prediction 35 50 - -
Aip09g00143 382 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 382 - -
Aip09g00143 382 Pfam Methyladenine glycosylase 165 338 IPR005019 GO:0006284|GO:0008725
Aip09g00143 382 MobiDBLite consensus disorder prediction 27 65 - -
Aip09g00143 382 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00143 Aip-Chr9 1141041 1145041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00143 K01246 - gmx:100805836 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00143 09 1141041 1145041 Aip09g00143 09 1141041 1145041 ECH