Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00077 ATGGGAGACAACAAAGTCGTGGACTTTTTCTCCCACAAGTTCCCAACCACCGCTCAGGTAGTGGAAGAACTGAAGGAGCTGTGGGGCATGGCGTTGCCAATCACAGCCATGAACTTATTAGTGTTCGTTCGTGCCGTTGTTTCGGTTCTCTTCCTCGGAAGACTGGGCCCATTGGAGCTAGCAGGTGGAGCACTGTCCATAGGCTTTACCAACATAACAGGGTACTCTGTTCTGGTGGGCCTAGCAGCGGGCCTGGAGCCGGTGTGCTCGCAGGCCTACGGCAGCAAGAACTGGGAGCTTCTGTCTCTTTCACTGCAGCGCATGGTGGTGATTCTCCTGATGGCAATAGTCCCCATAAGCCTTCTGTGGCTGAACCTGGAAGGGATCATGGTTTTCATGGGGCAAGACATAAGAATCACAAAAATGGCAGCTCTATACTGTTTCTACTCTCTGCCAGACCTTTTAACAAACACGTTGTTGCAGCCACTGAGAGTGTTCTTGAGGTCGCAGAAGGTGACGAAGCCAATGATGTACTGCTCGCTGGTGGCGGTGGTGTTCCACGTGCCGCTGAACTACGTGCTGGTGGTGGTGGTGGGGCTGGGAGTGCCTGGGGTGGCGATGGCGTCGGTGGTGACGAACCTGAACATGGTGGTGTTGATGGCGGTGTACGTGATAGTGTGGAGGAAGAAGGAGATGGTGATGAAGTGGGGAGGGATGAAGAAGATTCGAGGGCCTGGAGAGATGTGGGAGTTGATGAGAATGGCGGTGCCGAGTTGCTTGATGATATGTTTGGAGTGGTGGTGGTATGAGATTGTGACAGTGATGGCTGGCTATTTGGAGAATCCAACAGTTGCAGTTGCTGCCACTGGGATTCTCATTCAGACTACTAGCATGATGTACACTCTCCCTATGGCCCTTGCTGGCTGTGTTTCTGCCAGGGTTGGGAATGAGCTTGGAGCAGGCAGACCATACAAAGCAAAGCTAGCAGCCATTGTTGCCCTAGGATGTGCCTTTCTCATTGGCTTCATCAATGTCACATGGACTGTCATCCTTAAACAAAGTTGGGCCGGGCTTTTCACAACCGACGAGGCGGTCAAAGCCCTGGTTGCGTCGGTCATGCCAATTATGGGCTTGTGTGAGCTGGGTAATTGCCCACAGACCACGGGCTGTGGCATATTGCGTGGCACAGCCCGTCCGGTCATAGGGGCCCATGTCAATCTGGGATCCTTCTACATTGTGGGAACCCCTGTGGCTGTGAGCCTGGCATTTTGGTTTAAGATTGGGTTTAGTGGGCTTTGGTTTGGGCTTCTGTCGGCCCAAGCGGCGTGTGCCGTGTCAATCCTGTATGTTGTGATTGCAAAGACGGATTGGGAAGCTGAAGCCCTCAAGGCTGAGAAGCTCACAAGGGTGGTGGAGATTGGTCCATGCAATAATAGTAGTAGCAATAGGAATGAGAATTACAATGAAGATTTTGAGAGAGAGAATGAAGAAAGCATAAGGTTGTTGGTGATTGGGAATGGGAACAAAGATGACATTTGTTGA 1542 0.5182 MGDNKVVDFFSHKFPTTAQVVEELKELWGMALPITAMNLLVFVRAVVSVLFLGRLGPLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGSKNWELLSLSLQRMVVILLMAIVPISLLWLNLEGIMVFMGQDIRITKMAALYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVVFHVPLNYVLVVVVGLGVPGVAMASVVTNLNMVVLMAVYVIVWRKKEMVMKWGGMKKIRGPGEMWELMRMAVPSCLMICLEWWWYEIVTVMAGYLENPTVAVAATGILIQTTSMMYTLPMALAGCVSARVGNELGAGRPYKAKLAAIVALGCAFLIGFINVTWTVILKQSWAGLFTTDEAVKALVASVMPIMGLCELGNCPQTTGCGILRGTARPVIGAHVNLGSFYIVGTPVAVSLAFWFKIGFSGLWFGLLSAQAACAVSILYVVIAKTDWEAEALKAEKLTRVVEIGPCNNSSSNRNENYNEDFERENEESIRLLVIGNGNKDDIC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00077 513 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 478 - -
Aip09g00077 513 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g00077 513 Pfam MatE 257 418 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g00077 513 PANTHER PROTEIN DETOXIFICATION 13 478 - -
Aip09g00077 513 Coils Coil 477 497 - -
Aip09g00077 513 TIGRFAM matE: MATE efflux family protein 33 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g00077 513 CDD MATE_eukaryotic 23 463 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00077 Aip-Chr9 630538 633131 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00077 K03327 - gmx:100800364 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00077 09 630538 633131 Aip09g00077 09 630538 633131 ECH