Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00046 ATGAGCATCCTCACTGCAACAACAACACTCTTGATCCTCTTCACCATCTTCACACCGCTACACCTCAAGGCCGATGCAGCAAAATGCCACCCGGATGACGAAGCAGGCCTATTGGGCTTCAAATCGGGTATCAAATCAGACCCATCTGGGATGCTCAGCAAATGGATACGCGGGACCGATTGTTGCACGTGGCCTGGCCTCAACTGCCTATTTGAAAACAAACGGGTCACAAGCATTTCTATTGCGGGTCAACCCGACCAACCCAATAGCTTCTTATCGGGTACCATATCGTCCTCCCTCTCAAAGCTCCAATTTCTCGACGGTATCTATTTCACTAATCTCCGAAACATATCGGGTCCCTTCCCGGGTTTCCTCCTCAATATGCCCAACCTCGAATACATCTACATCGAGAACAGCCAGATCTCGGGTCGCATACCCGATTCTTTTGGAAACTCCACTCGAAAATTTGGCGCCTTCAGCTTCCAAGGCAACCGCTTAACCGGAACAGTGCCGAGTTCACTATCCCTGTTGACTCAGCTCACTCAGCTCAAACTCGGCGACAACCTCCTCACCGGTGCTATCCCAGACGGGATTCGGAACCTCAAGAACCTCACATATCTGAGTTTGCAAGGCAACCAGCTCAGTGGTAACATTCCCGATTTTTTCACTTCGTTAAAGAACCTCAGGATTCTAGAACTTTCTCGGAACAAATTTTCCGGCACGATTCCGGCGTCGATTGCCACGCTGGCACCAACACTGGGATACCTGGAACTGGGACACAACTCGCTTTCCGGGAAAATCCCTGATTTTCTAGGGAAAATGAAGGCTCTCGACACACTCGATCTCTCCTCGAACCGATTCACGGGAAGCGTGCCGCAGAGCTTCAAGAACTTGACGAAGATCTTCAACCTGGACCTCTCCAACAACTTGCTGGTAGACCCGTTCCCCGAGATGAACGTGAAAGGAATTGAATCTCTGGATTTGTCGAACAACAACTTGCACCTGGGAACAATCCCCAAGTGGGTGACTTCGTCTCCGATTATCTACTCGTTGAAGCTGGCCAAGTGTGGAATAAGGATGAAGCTGGATGATTGGAAGCCTTCGGAGACTTACTTCTACGACTACATCGATCTCTCCGGAAACGATATCTCAGGGAGCGCCATTGGATTGCTGAACAGAACAGACTATTTGGTAGGGTTCTGGGCTTCGGGGAACAAATTGAAGTTCGACATGGGAGGTTTGAGGATCGTGGAGAAGCTCAAGTACTTGGATTTGTCTAGAAATTCGGTGTTTGGAAAGATTCCTAAGGGTGTGGTTGGGCTTCAGAAGCTGAACGTCAGTTATAACCATCTTTGTGGTCAGATTCCAAAGACTCAGTTCCCAGCCAGTGCCTTTGCCGGAAATGATTGTTTGTGTGGTCCTCCTTTGCAGCCATGTAAGGCCTAG 1446 0.4945 MSILTATTTLLILFTIFTPLHLKADAAKCHPDDEAGLLGFKSGIKSDPSGMLSKWIRGTDCCTWPGLNCLFENKRVTSISIAGQPDQPNSFLSGTISSSLSKLQFLDGIYFTNLRNISGPFPGFLLNMPNLEYIYIENSQISGRIPDSFGNSTRKFGAFSFQGNRLTGTVPSSLSLLTQLTQLKLGDNLLTGAIPDGIRNLKNLTYLSLQGNQLSGNIPDFFTSLKNLRILELSRNKFSGTIPASIATLAPTLGYLELGHNSLSGKIPDFLGKMKALDTLDLSSNRFTGSVPQSFKNLTKIFNLDLSNNLLVDPFPEMNVKGIESLDLSNNNLHLGTIPKWVTSSPIIYSLKLAKCGIRMKLDDWKPSETYFYDYIDLSGNDISGSAIGLLNRTDYLVGFWASGNKLKFDMGGLRIVEKLKYLDLSRNSVFGKIPKGVVGLQKLNVSYNHLCGQIPKTQFPASAFAGNDCLCGPPLQPCKA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00046 481 Gene3D Ribonuclease Inhibitor 33 154 IPR032675 -
Aip09g00046 481 Gene3D Ribonuclease Inhibitor 155 249 IPR032675 -
Aip09g00046 481 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 11 480 IPR045273 -
Aip09g00046 481 SUPERFAMILY L domain-like 98 191 - -
Aip09g00046 481 Pfam Leucine Rich Repeat 130 151 IPR001611 GO:0005515
Aip09g00046 481 Pfam Leucine Rich Repeat 419 437 IPR001611 GO:0005515
Aip09g00046 481 Pfam Leucine Rich Repeat 227 247 IPR001611 GO:0005515
Aip09g00046 481 Gene3D Ribonuclease Inhibitor 250 480 IPR032675 -
Aip09g00046 481 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 480 - -
Aip09g00046 481 SUPERFAMILY L domain-like 160 453 - -
Aip09g00046 481 SMART LRR_typ_2 201 224 IPR003591 -
Aip09g00046 481 SMART LRR_typ_2 274 297 IPR003591 -
Aip09g00046 481 SMART LRR_typ_2 225 249 IPR003591 -
Aip09g00046 481 SMART LRR_typ_2 177 200 IPR003591 -
Aip09g00046 481 SMART LRR_typ_2 438 467 IPR003591 -
Aip09g00046 481 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Aip09g00046 481 Pfam Leucine rich repeat 251 311 IPR001611 GO:0005515
Aip09g00046 481 Pfam Leucine rich repeat 163 214 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00046 Aip-Chr9 381530 383669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00046 32 458 Receptor kinase-like Gene Family AT3G56370 32.826 4.96e-51 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00046 - - gmx:100305447 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00046 09 381530 383669 Aip09g00046 09 381530 383669 ECH