Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00018 ATGCAGAGATCTCGCAAAGCTCTTCTTCAAAGAAGGGCTAAAACCTGCAGAAGCTATCTCTATAAACTGTCTATGTCCTTGGTTTTTGTTTTGTGGGGACTGATTTTCCTCTACAGCTTGTGGATAAGTCGAAGCCATGGTTACACAGCTACAGATGCAGATGGATCTGGAGAACTCCCAGTTGCTGTATCAAATGGCAACAAAGAAGAGGACACATACTGCAAGATTAAAGAAACCGATGCTCACGTTTCCGTTGAGGATTTGTCACTTCTCAGTAGAGAAAGCATAAGTTCTGTTAAACCCGGTGATAAGCAAACTAGAGAAGAAGATGAAGCTGAGAGATCTGAATCTGAATCTGATATGCTTAAGCCTCTTGGTCTTGATGAATTCAAGAGCAGGGCAATCAGTTCCAAAATCAAGTCAGGTACTGGTCCCTCCGGAAATGTGATCCACAGAGTAGAGCCCGGTGGTGCAGAATACAATTATGCTTCCGCATCAAAGGGCGCTAAAGTTCTAGCTTCTAATAAAGAAGCCAAGGGTGCCGCTAATATCTTAACCAGAGACAAAGACAAATATCTTCGGAATCCTTGTTCTGCAGAAGACAAATTTGTCATCATCGAACTTTCAGAAGAAACATTGGTTGGTACAATAGAAATAGCTAATTTAGAGCATCATTCCTCCAATTTGAAAACTTTTGAATTGCGTGCAAGTTTGGTGTATCCAACAGATGTTTGGGTATTCCTTGGGAATTTTACTGCCTCAAATGTGAAGCAGGCCCAAAGGTTTGTTCTTCATGAGCCGAAATGGGTGAGGTACCTGAATTTGAACCTCCAGAGCCACTATGGTTCAGAATTTTACTGCACTCTAAGTGTGATTGAAGTTTATGGTGTGGATGCAGTGGAGAGGATGCTGGAGGACTTGATACATGCTCCAGATAACCCATTTTCATCCGGTGAAGACAAGAGGGCTGCTGAGGAAGATGATGTTGGCCAAATTAATTTTGGAGGAGCCAATTCTGAAGTGTCTTCTGTAAACCAGGAGGCTGTTCCTGATCCAGTTGAAGAAATCCGTCAACAAGTTGGCAGGATGCCTGGGGATACTGTGCTCAAGATTTTGATGCAGAAAGTTCGTTTTCTAGATTTGAACTTGTCTGTTTTGGAGCAGTACATGGAGGAATTGAATTCTAGATATGTCAATATTTTCAAAGTGTACAGCAAGGACATTGCAGAAAAGGATATACCTATACAAATGATCAGAGATGACATTAGGAATTTCCTTCACCGGCAGGATGCTATGATGAAACATGTTAGAGACTTAGATTCTTGGAAGTCCCATATCTCCATGCAGTTGGATCATGTACGTAGGGACAATGCTGTTCTGAGGTCTGAGGTTGAAAACGTCCGGGAGAATCAAGAATATTTGGAAAACAAGGGTGTGGTTGTGTTTCTTGTCTCTGCTATTTTTTCATTGCTTGCTATCTTGCGGCTGTTTCTGGATACGGCTATGAGCATATACCGAACACTAAGTTATCAAAAAACAAATAATTCCAGGAAATTTTGTGAAGCTAGCTCTCCCTGGTTGCTCCTATTATTGACTTGTACCATTATTATTTTTATATTAACTATATGA 1629 0.4113 MQRSRKALLQRRAKTCRSYLYKLSMSLVFVLWGLIFLYSLWISRSHGYTATDADGSGELPVAVSNGNKEEDTYCKIKETDAHVSVEDLSLLSRESISSVKPGDKQTREEDEAERSESESDMLKPLGLDEFKSRAISSKIKSGTGPSGNVIHRVEPGGAEYNYASASKGAKVLASNKEAKGAANILTRDKDKYLRNPCSAEDKFVIIELSEETLVGTIEIANLEHHSSNLKTFELRASLVYPTDVWVFLGNFTASNVKQAQRFVLHEPKWVRYLNLNLQSHYGSEFYCTLSVIEVYGVDAVERMLEDLIHAPDNPFSSGEDKRAAEEDDVGQINFGGANSEVSSVNQEAVPDPVEEIRQQVGRMPGDTVLKILMQKVRFLDLNLSVLEQYMEELNSRYVNIFKVYSKDIAEKDIPIQMIRDDIRNFLHRQDAMMKHVRDLDSWKSHISMQLDHVRRDNAVLRSEVENVRENQEYLENKGVVVFLVSAIFSLLAILRLFLDTAMSIYRTLSYQKTNNSRKFCEASSPWLLLLLTCTIIIFILTI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00018 542 MobiDBLite consensus disorder prediction 96 123 - -
Aip09g00018 542 Gene3D - 170 307 - -
Aip09g00018 542 Coils Coil 450 477 - -
Aip09g00018 542 SUPERFAMILY Galactose-binding domain-like 179 295 IPR008979 -
Aip09g00018 542 ProSiteProfiles SUN domain profile. 135 299 IPR012919 -
Aip09g00018 542 Pfam Sad1 / UNC-like C-terminal 175 297 IPR012919 -
Aip09g00018 542 PANTHER MEMBRANE PROTEIN CH1 RELATED 98 541 IPR045120 GO:0016020
Aip09g00018 542 PANTHER MEMBRANE PROTEIN CH1 RELATED 1 85 IPR045120 GO:0016020
Aip09g00018 542 MobiDBLite consensus disorder prediction 100 123 - -
Aip09g00018 542 PANTHER GALACTOSE-BINDING PROTEIN 1 85 - -
Aip09g00018 542 PANTHER GALACTOSE-BINDING PROTEIN 98 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00018 Aip-Chr9 190931 193204 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00018 - - gmx:100786657 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00018 09 190931 193204 Aip09g00018 09 190931 193204 ECH