Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03397 ATGAAAACCAGAGCTAGAACTCGAAAGGTTCTTGCTGCTGATAATGGCGATGATCAAGTGGGTGTTGTGAAGCAAGATACAGAAGTAAGCCCAAGATGTAGAATTGAGCTTGTCTATAGTCGTCGAGGAAAGAAAAGTGAGCCCGTAATAGATGTGACAAGAAGTGTTACCAACTCATTGCCCTGTTATTTGAGTGACATGACTCGGAAAGTGCAATCAAAGAGGAAGAGAAAATCTGATGACGAGGAAGAACTCTGTAAACCCAGAGAAAAGCTAGACAGTGGATTGTTCGGTGAATACTTGGAGAAAATATGGAGGAGTTTCTCGGAAGAGAAGAGAAGGCGCAGCACATACTTTGACAGCTTATGGTTTAGCCTATACAGGAGGGCCTCATGTAAAGAGAAGGTGCTGACTTGGATAAAAAAGGCGCATATTTTCTCAAAGGCATATGTTTTTGTTCCAATAGTTTGCTGGGGTCACTGGAGCCTTTTGATCTTCTGCCATTTTGGTGAGAGCGCGCAAACAAATACCAGATCACGTTGCATGTTGTTGCTAGATTCTCTTGCAATGGCGAATCCAAGGCGACTTGAACCGGAGATAAGAAGATTTGTTCTAGATATTTATCAGGCAGCGGACAGGCCAGAAACTAAGAAAATCGTATCTCGAATTCCGTTGTTGATTCCTAAGGTGCCACAACAAAGAGACGGTAATGAATGTGGAAACTTTGTTCTCTATTTCATTAAACTGTTTCTTAGTGTCGCCCCCGATGATTTTAGCATGGAAGGGTATCCTTACTTTATGAAAAAAGATTGGTTTACCCACGAAGGCTTGGATAGGTTTCTTGAGGGACTTGATTCAATGGGCTAG 867 0.4233 MKTRARTRKVLAADNGDDQVGVVKQDTEVSPRCRIELVYSRRGKKSEPVIDVTRSVTNSLPCYLSDMTRKVQSKRKRKSDDEEELCKPREKLDSGLFGEYLEKIWRSFSEEKRRRSTYFDSLWFSLYRRASCKEKVLTWIKKAHIFSKAYVFVPIVCWGHWSLLIFCHFGESAQTNTRSRCMLLLDSLAMANPRRLEPEIRRFVLDIYQAADRPETKKIVSRIPLLIPKVPQQRDGNECGNFVLYFIKLFLSVAPDDFSMEGYPYFMKKDWFTHEGLDRFLEGLDSMG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03397 288 Gene3D Adenoviral Proteinase; Chain A 51 273 - -
Aip08g03397 288 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 58 286 - -
Aip08g03397 288 Coils Coil 64 84 - -
Aip08g03397 288 Pfam Ulp1 protease family, C-terminal catalytic domain 105 270 IPR003653 GO:0006508|GO:0008234
Aip08g03397 288 SUPERFAMILY Cysteine proteinases 84 266 IPR038765 -
Aip08g03397 288 ProSiteProfiles Ubiquitin-like protease family profile. 75 250 IPR003653 GO:0006508|GO:0008234
Aip08g03397 288 PANTHER CYSTEINE PROTEINASES SUPERFAMILY PROTEIN 58 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03397 Aip-Chr8 125218787 125221498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03397 - - ahf:112783467 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03397 08 125218787 125221498 Aip08g03397 08 125218787 125221498 ECH