Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03384 ATGCAAAGCCTTGAATCACCTTATCTCTTTTTCTTCACTTTCCCTAAACCCTTAAACGCTCCTTCCACCTCTTCATTCCACCCTCGATACCGTCCTCCGCCACCGCCTCTGCGCCTCCACCGCCACCACCCTCCCCTCAAATGCTTCGCCTCCGACGAGTTCCCCGTCGACGAAACCTTACCCGAAAACTTCGTCCACAGGAACAAAGAAACCGAAGACGAAGCTCGCCGCCGAAACTGGATCGACCGCGGTTGGGCGCCATGGGAGGAAATCCTCACTCCCGAAGCCAATTTGGCTCGAAAGAGCCTAAACGAAGGCGAAGAGGTGCCTCTGAAAACTCCCGAAGCCATTGAAGCGTTCAACATGCTGAGCCCTAGCTACAGGAAGAAGAAGATGGAGGAATTGGGGATGGACGAGGACGAATTCTCTGAGAAGCAGTTTGAGATCAAAGGGGAGATTCCGGAGCCTATTGAGACGCTTTGGGCGGGTCCTATGGTGGTGCGCTTGGTGCCGCCGAGGGATTGGCCGCCGCGGGGATGGGAGGTGGATAGGGAGGAGCTGGCGTTCATGAGGGAGGCGCATAAGATGCTGGCCAGGAGAGTGAGTTTGGAACAACTTGAAGGTGGTGTGATTGTGGATGAAGACTATGATACTGGTGGGCTTGCATTGGATAGGTACAAGGTGTTCTTGAAGCAGTATGAGGAATGGGTTGAAGCTAATAGGGATAGGTTGGAGGAGGAATCTTATCTGCATGACCAAGATTATCACCCTGGTAGGAGGAAAAGAGGGAAAGACTACAAGGAGGGCATGTATGAGCTTCCATTCTATTATCCTGGTCAAATTTGTGAAGGGATGGTGACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGCGTATATGAGGGGTGGGTTCCCATAAAGAACAATGACTGGTATTGGATCCGCCATCACATAAAAGTGGGTATGCATGTCATGGTTGAAGTTTTGGTGAGTTTTCCCTCTTTCCGATTTCCGATCGAACTTCGGTTTGTCCATCCAAATATAGATCATCTGATCTTTAACAGATTCGAGTACCCACCAATATTTCAACGTAACGATACTAACCCAGATGAAATACGGCGAGACTGTGGAAGGCCTCCCATTCCTAGGAAAGATCCTGGAGACAAGCCGGAGGAAGAACCTTTGTTGTCAGATCACCCATATGTTGACAAGTTATGGCAGATTAATGCAGCTGAGCAAATGATTTTGACGGATATGGAGGTTAATCCAGATAAATATAAAGGCAAAAAGCTGTCAGAGTTGACTGATGAAGACGACTTTGATGAACAAAATTCTGTTCAGCATACAGAAGTCAAATATAAGAACACAATATTACCCAAGACTATTCTGAAAGTAAGTGTCAAAGAGCTTGACTTAGAGGCTGCATTTGCTGAGCGTCAGCACCATAATAAACAATTTGCGGAAGCAAAAGCCAGAGGCGAGGAGTACGAAGTTTCCAAATTAAGGCGTCACATCGAGATGGATGAGTATGATGCCATGCATTGGCGCAGATCATTTGAGGAAAGAGAAGCCCTGCTTAGAGACGTCAGCTGTCGCAAAGCGCTTGGTCTGCCATTGGAAGAACCAGGAAGGTATGTGGATGCCAGTCACTTTGGTAAAGACCAATTTGATCCTGAAAATCCTTTATATCGTTATGATTATTGGGGAGAACCCAAGAATTCAGAGAAGAGCAGGCTAGAACGCATAGCAGATCAACATAACAAATCAATTGTGGGGAAGGGCACTGTTTGGTATGAGATGTCATATGAAGACTGCATCAAGCAACAAGAAGTAAGAAAAGCTCAGGCCAAGAGAGAGAGGGAAGAAGAACGGAGGAATGCAGATAACAAGCAAGATCAGGGCTCAAATGAGGACGAAGATTCTGATTCTGATGACGACTTTGACTTTAGCCTGCTGAGAAATGTAGATGGCAACTTGTCTGAACAGATTCATGTTAATGGAACCGAGTCCTTCAAAATGTCAGACGAGGGTATGTTTGAGGAGTGA 2055 0.4696 MQSLESPYLFFFTFPKPLNAPSTSSFHPRYRPPPPPLRLHRHHPPLKCFASDEFPVDETLPENFVHRNKETEDEARRRNWIDRGWAPWEEILTPEANLARKSLNEGEEVPLKTPEAIEAFNMLSPSYRKKKMEELGMDEDEFSEKQFEIKGEIPEPIETLWAGPMVVRLVPPRDWPPRGWEVDREELAFMREAHKMLARRVSLEQLEGGVIVDEDYDTGGLALDRYKVFLKQYEEWVEANRDRLEEESYLHDQDYHPGRRKRGKDYKEGMYELPFYYPGQICEGMVTTLHLYQGAFVDIGGVYEGWVPIKNNDWYWIRHHIKVGMHVMVEVLVSFPSFRFPIELRFVHPNIDHLIFNRFEYPPIFQRNDTNPDEIRRDCGRPPIPRKDPGDKPEEEPLLSDHPYVDKLWQINAAEQMILTDMEVNPDKYKGKKLSELTDEDDFDEQNSVQHTEVKYKNTILPKTILKVSVKELDLEAAFAERQHHNKQFAEAKARGEEYEVSKLRRHIEMDEYDAMHWRRSFEEREALLRDVSCRKALGLPLEEPGRYVDASHFGKDQFDPENPLYRYDYWGEPKNSEKSRLERIADQHNKSIVGKGTVWYEMSYEDCIKQQEVRKAQAKREREEERRNADNKQDQGSNEDEDSDSDDDFDFSLLRNVDGNLSEQIHVNGTESFKMSDEGMFEE 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03384 684 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 37 670 IPR044967 GO:0000427|GO:0003723
Aip08g03384 684 SUPERFAMILY Nucleic acid-binding proteins 275 332 IPR012340 -
Aip08g03384 684 Gene3D - 276 338 IPR012340 -
Aip08g03384 684 Coils Coil 609 636 - -
Aip08g03384 684 ProSiteProfiles S1 domain profile. 279 345 IPR003029 GO:0003676
Aip08g03384 684 MobiDBLite consensus disorder prediction 617 639 - -
Aip08g03384 684 MobiDBLite consensus disorder prediction 370 399 - -
Aip08g03384 684 MobiDBLite consensus disorder prediction 367 399 - -
Aip08g03384 684 MobiDBLite consensus disorder prediction 617 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03384 Aip-Chr8 125116953 125124162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03384 - - gmx:100783002 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03384 08 125116953 125124162 Aip08g03384 08 125116953 125124162 ECH