Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03383 ATGGCACCAACTGTACCAATAGACTTTGCTGGGCAAAAGGAATCCAGGTTGTACGCTCACTCACAGACAATGGGCAAGTCTAGGAAATACTCCAAAGGCTTTTCTACTGGATTTGTTCCGGATTTCCGACATGCGGTGGAGACTATGGGTGAATCAGAGGGGTTGGGTAGCTCCGGACGGGTTGATACGGAACTGACAGCGCCAAAGAGGAAATGCATTGGATTGAATGCTGATGGTTATGGTGATTTTGATGTGCCATTCCAGCATTTCAAATTGTCAAAGATGTCAGATTTCGAGAGGAAGGACTTGAAACAGAGGTTAGCACGGGAGCTCGAACGTGTAAGGGAACTTCAGAAGAAAGTTGATGGTATGAAGCCGAATGTTGTTGCATTAACTTCCCCCGGCGATATTAGGGGCTGCAGTGCGGGACAGAAAAGACCTCACCCGGAGAGCAAGTATAGACCACAAGAAGCATCGGTGCCCCAGGGTAAGAAAAGGCCCTTACCAGGACATAACGGTCCAAAGACCAAAAAAAGTATGTCTGGGCAGTTTGAGCATGCAAAACCTGCTGATTCTTCATTAGCTGCATTGATGAAACCTTGCGAGACATTACTTAACCGGTTGATGTCTCATCAGTTTAGTTGGGTTTTTAACACACCAGTTGATGCTGTTAAATTGAACATTCCGGATTATTTCAATGTCATCAAACATCCCATGGATTTGGGTACAGTGAAGAATAGAATAACGTCTGGTAAATATTCAAGTCCTATGGAGTTTGCTGCAGATGTACGGCTAACTTTTTCAAACGCAATGACTTATAATCCACCTGGGAATGATGTACACCTCATGGCAGAGACTCTTAGTAAGATGTTTGAAACGAAATGGAAGCCGATAGAGAAGAAACTTCCTGCCATGAACAGTGCTCGTTCTGAGCCATCAAAGTCAACTGCTTATATAGAAACTGGAAATTTTAACCAAATTCCTCCCATGAAAAAGAATAAAATTACCCCGAAAGAAACTAAAGTGAAACCAGAGCCTGTTAAAAGAACCATGACTGATGAGGAGAAGCATAAATTGAGTATGGAGTTGGAGGCAATGCTTGGAGAGTTGCCTGAAACCATTGTTGACTTCTTGAAAGAGCAAAGTTATGGTTCAGGTCAGGCCAATGATGATGAGATTGAGATTGACATTGATGCCCTAAGTGATGATACCTTATTCAAATTGCGGAAGCTTCTTGATGATTATGTGCTGGAGAAGCAAAAATCCGTGGCCAAAGCGAGACAGAGTGAAATGGAGCTTGTGAATGAATCTGGGTTTAGCAACTCGTCAATGCAACCACCTAAAGGTAATGATCAAGTTGAGGAGGATGTGGACATTGTTGGTGTGAATGATCCTCCTGTATCAAATTATCCTCCAGTAGAGATTGAGAAAGATGGTGCCAACAGAAACACTAAATGCAGCAGTTCAAGTAGCTCCAGTAGTGAATCTGGCTCTTCTTCCAGTGATTCAGACTCAGCTAGTTCCTCGGCTAGTGAGTTAGACACTGCCAAATCCCCAGAACCTCCTAGTGCCAAGGAAAATGTAGGGCCTGTCTTTATTTCCAATCAAAACAGACAGGATCCTGGTAATTCTGAGTCCGAAAAGGATTCAATTAATGTGGATGGCCAAGCCGAAAAGGATTCGCAGACCAAACTAGTGACTACTGAGCCAGAAAGCCTTCAAGAGGGGGAGAGTGCTCCACCTCAGAGGCAAGTCTCTCCCGACAAGCTCTACCGGGCAGCTTTACTAAGGAGCCGGTTTGCTGACACTATTCTTAAAGCTCGAGAGAAGGCTCTTGAAAAGGCCGAAAAGCAGGATCCAGAAAAACTTAGGATGGAGAGAGAAGAACTTGAAAGGAGGCAGAAGGAAGAGAAAGCACGGTTGCAGGCAGAGGCAAAGGCTGCAGAAGAGGCTCGGAGGAAAGCTGAAGCAATAGCTGCAGCTGAAGCTAAGAAGAAGAGGGAACAGGAGAGAGAAGCAGCTCGGTTGGCATTGCAAAAGATGGAGAAAACTGTTGACATCAACGAGGGCAGTCAATTTTTGGAAGATCTGGAGATGCTGAGTGCTGTACAAGGTGAACAGTTCCCAAGCTACATAGAAGAGGCGAGCCCAGATCCTCTACAAAGTAGATTGGGTAGTTTCAAGCTACAGGGAAATCCTTTAGAACAGCTAGGATTGTATATGAAGGACGATGATGAGGATTTGGACGAAGAACTGCCTCAGGGTGCTGCAGGACAACCAAAAGATGAAGAGACGGCTAGTGCTGCTCCTGGTGAACAGTTACCAATTTTCAAAGACGAGACAAATCCAGATCATCCTGAAGGTGGATTGGATAGTTCCAAACAGGAGGGTAATCCCTTAGAGCAGTTGGGATTATACGTGAAGGATGATGATGAAGATTTGGAGGAACAACCACCTCAACGTGCTGCTGGGAAATCAAATGATGTTGAAGAAGGAGAAATTGACTGA 2508 0.4474 MAPTVPIDFAGQKESRLYAHSQTMGKSRKYSKGFSTGFVPDFRHAVETMGESEGLGSSGRVDTELTAPKRKCIGLNADGYGDFDVPFQHFKLSKMSDFERKDLKQRLARELERVRELQKKVDGMKPNVVALTSPGDIRGCSAGQKRPHPESKYRPQEASVPQGKKRPLPGHNGPKTKKSMSGQFEHAKPADSSLAALMKPCETLLNRLMSHQFSWVFNTPVDAVKLNIPDYFNVIKHPMDLGTVKNRITSGKYSSPMEFAADVRLTFSNAMTYNPPGNDVHLMAETLSKMFETKWKPIEKKLPAMNSARSEPSKSTAYIETGNFNQIPPMKKNKITPKETKVKPEPVKRTMTDEEKHKLSMELEAMLGELPETIVDFLKEQSYGSGQANDDEIEIDIDALSDDTLFKLRKLLDDYVLEKQKSVAKARQSEMELVNESGFSNSSMQPPKGNDQVEEDVDIVGVNDPPVSNYPPVEIEKDGANRNTKCSSSSSSSSESGSSSSDSDSASSSASELDTAKSPEPPSAKENVGPVFISNQNRQDPGNSESEKDSINVDGQAEKDSQTKLVTTEPESLQEGESAPPQRQVSPDKLYRAALLRSRFADTILKAREKALEKAEKQDPEKLRMEREELERRQKEEKARLQAEAKAAEEARRKAEAIAAAEAKKKREQEREAARLALQKMEKTVDINEGSQFLEDLEMLSAVQGEQFPSYIEEASPDPLQSRLGSFKLQGNPLEQLGLYMKDDDEDLDEELPQGAAGQPKDEETASAAPGEQLPIFKDETNPDHPEGGLDSSKQEGNPLEQLGLYVKDDDEDLEEQPPQRAAGKSNDVEEGEID 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03383 835 ProSiteProfiles Bromodomain profile. 209 281 IPR001487 GO:0005515
Aip08g03383 835 MobiDBLite consensus disorder prediction 461 587 - -
Aip08g03383 835 MobiDBLite consensus disorder prediction 128 188 - -
Aip08g03383 835 Gene3D - 344 422 IPR038336 -
Aip08g03383 835 MobiDBLite consensus disorder prediction 612 648 - -
Aip08g03383 835 PRINTS Bromodomain signature 212 225 IPR001487 GO:0005515
Aip08g03383 835 PRINTS Bromodomain signature 228 244 IPR001487 GO:0005515
Aip08g03383 835 PRINTS Bromodomain signature 244 262 IPR001487 GO:0005515
Aip08g03383 835 PRINTS Bromodomain signature 262 281 IPR001487 GO:0005515
Aip08g03383 835 ProSiteProfiles NET domain profile. 341 423 IPR027353 -
Aip08g03383 835 MobiDBLite consensus disorder prediction 482 516 - -
Aip08g03383 835 PANTHER TRANSCRIPTION FACTOR GTE10 766 825 - -
Aip08g03383 835 PANTHER TRANSCRIPTION FACTOR GTE10 25 753 - -
Aip08g03383 835 Pfam Bromodomain extra-terminal - transcription regulation 351 413 IPR027353 -
Aip08g03383 835 Pfam Bromodomain 201 285 IPR001487 GO:0005515
Aip08g03383 835 Gene3D - 171 311 IPR036427 GO:0005515
Aip08g03383 835 Coils Coil 100 120 - -
Aip08g03383 835 MobiDBLite consensus disorder prediction 556 581 - -
Aip08g03383 835 SUPERFAMILY Bromodomain 191 303 IPR036427 GO:0005515
Aip08g03383 835 MobiDBLite consensus disorder prediction 735 835 - -
Aip08g03383 835 SMART bromo_6 190 300 IPR001487 GO:0005515
Aip08g03383 835 Coils Coil 624 684 - -
Aip08g03383 835 PANTHER TRANSCRIPTION FACTOR GTE8 25 753 - -
Aip08g03383 835 PANTHER TRANSCRIPTION FACTOR GTE8 766 825 - -
Aip08g03383 835 CDD Bromo_plant1 197 295 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03383 Aip-Chr8 125110070 125116663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03383 - - adu:107478848 1448.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03383 08 125110070 125116663 Aip08g03383 08 125110070 125116663 ECH