Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03372 ATGAAACTCGATACTTCTGGTCTCGAATCGTTCTCTACACTCACTGCACCCGGAGACGACGTCGTTGGAGAGTTCTCTGCCCCGCCGTCATTCCAGCTTCCTAATTCCAATGATTTCGATGGCTTTGTGAAAGAAGCTATTCAGATGGTGAAGCCTGCAAAGGGTACTACAACGCTTGCTTTTATATTTAAGGACGGTGTCATTGTAGCTGCTGATTCTAGAGCTAGCATGGGAGGATATATATATGTGACTTCACAGTCTGTAAAGAAGATTATTGAAATTAATCCATATATGCTTGGAACAATGGCCGGAGGTGCCGCTGATTGCCAATTTTGGCACAGAAATCTTGGGATAAAGTGTCGGTTGCACGAGTTGGCAAATAAAAGGAGGATATCAGTAACCGGAGCCTCAAAGCTACTTGCAAATATTTTATACTCTTATCGTGGAATGGGTTTATCAGTCGGTACCATGATTGCTGGATGGGATGAAACAGGTCCTAGTCTATATTATGTTGATAGTGAAGGAGGAAGATTGAAAGGCACTAGATTCTCTGTTGGATCTGGTTCACCATATGCTTATGGTGTATTGGACAATGGGTACCGATATGACCTGTCAGTTGAGGAAGCTGTTGAACTAGGTCGACGAGCAATATATCATGCAACATTCCGTGATGGAGCTAGTGGTGGAGTTGTTAGCGTTTACCATGTGGGACCAGAAGGATGGAAGAAATGGACTGGTGATGATGTTGGGGACCTACATTACCAATACTACCCTGTTGTCCCAAGCACTGTGGAACAAGAAATGGTTGAGGCAACAGGAGCTTAA 825 0.44 MKLDTSGLESFSTLTAPGDDVVGEFSAPPSFQLPNSNDFDGFVKEAIQMVKPAKGTTTLAFIFKDGVIVAADSRASMGGYIYVTSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPSLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDLSVEEAVELGRRAIYHATFRDGASGGVVSVYHVGPEGWKKWTGDDVGDLHYQYYPVVPSTVEQEMVEATGA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03372 274 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 56 266 IPR029055 -
Aip08g03372 274 PRINTS Proteasome component signature 186 197 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aip08g03372 274 PRINTS Proteasome component signature 63 78 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aip08g03372 274 PRINTS Proteasome component signature 197 208 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aip08g03372 274 PRINTS Proteasome component signature 222 233 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aip08g03372 274 PANTHER PROTEASOME SUBUNIT BETA 29 273 - -
Aip08g03372 274 CDD proteasome_beta_type_5 56 243 - -
Aip08g03372 274 ProSiteProfiles Proteasome beta-type subunit profile. 55 236 IPR023333 -
Aip08g03372 274 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 29 273 - -
Aip08g03372 274 Pfam Proteasome subunit 54 236 IPR001353 GO:0005839|GO:0051603
Aip08g03372 274 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 26 256 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03372 Aip-Chr8 124989918 124992273 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03372 K02737 - gmx:100779240 502.671