Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03361 ATGGCACCGCACGATCTCCGCCGTCCATTCAAACGACCGTTGATCTCTGATCAAGAGAAGCGCAGGCAGCAGTCCCTGCTCCGGCAGGCACAGAATCGACGCGACGCCCAGAACCATGCTCGATTCCTCGCCTCCACCGCCTTATCGCTCGAACAACCGCACGAACTCGAACCCGAACCCGTATCAGCACCCGAACTTCACGACGAACTTATACCTGACTCTGAAGCTCCCGAGTCACCGAAGGAGCTTGACGTGGTTGAAGCGTCGAAGCTGAAAGGCGCGGAGGCTCGGAAATGGTTCGCGAAACAGCTGATGCATCCCGAATGGATGATCGACATTCCCGAAAATCTCTCACAAGACTGGTTTGTGTTTGCTAGGCCTTCTGGAAAACGATGCTTTGTGGTTTCGTGCAACGGCACGACGATAAGTCGTTTAAGGAACGGTTCGATACTGCACCGTTTTCCGTCGGAGTTACCGAATGGTGCGAGAAGAAAGGATTCCTCTGGTCCTGCTCAGTCTTACTCCATTTTGGACTGCATTTTTCACGAGGTGGATCAGACTTACTATGTGATTGACATGGTTTGCTGGCGGGGCTACTCGCTTTATGATTGCGCTGCAGAATTTAGGTTTTTCTGGTTGAATTCCAAGCTTGCTGAGACTGGCGCTTGTGAACCTCCCTCGCATTATCACAAGTACAGGTTCAGTTTGGTTCCAGTGTACTGCTGCGACCAGAGTGGTTTATGTGCTGCTTATACTGGATCTGTGCCTTATGTCAAAGATGGTCTTCTGTTTTATAACAAGCATGCACACTATCAGACAGGAATTACACCACTAGCATTGGTTTGGAAGGATGAGAACTGCAGTCAGTATGTCATGGACACAGATAGCAAAGGACAGGTTCCAAATCATCAGCAGGTGGTTTTGGAGCTACAAGAAGGTGGAAAGCTGTGCACTTCCGATGATCCTCCTGTAGTATTTGGATGTTTAGATGGAGGCTTTATGCATGAGTCAGAGTTGCATTCAGGATGTCTTGTACGGTTTGCAATTGGAGAAGGGGGACTGGTTTTGGTGGATGGAAAACTTGAGAAAGCTGATCTAAATTATCTAGGCAAGGCCAACCGTGCTCGTGCTTCTGCTGATAGTTTCTCTAAGGTAGTTATGTTCCAATACAGTGTTCGACACTCTCCTCTAAGAATTGATGATTTGTTAGGATCTGTCAACTCAGCAGCTGATGAAAGTAACAAAGTTTGTGATATTGAAATGGATGGTTGA 1272 0.4803 MAPHDLRRPFKRPLISDQEKRRQQSLLRQAQNRRDAQNHARFLASTALSLEQPHELEPEPVSAPELHDELIPDSEAPESPKELDVVEASKLKGAEARKWFAKQLMHPEWMIDIPENLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSELPNGARRKDSSGPAQSYSILDCIFHEVDQTYYVIDMVCWRGYSLYDCAAEFRFFWLNSKLAETGACEPPSHYHKYRFSLVPVYCCDQSGLCAAYTGSVPYVKDGLLFYNKHAHYQTGITPLALVWKDENCSQYVMDTDSKGQVPNHQQVVLELQEGGKLCTSDDPPVVFGCLDGGFMHESELHSGCLVRFAIGEGGLVLVDGKLEKADLNYLGKANRARASADSFSKVVMFQYSVRHSPLRIDDLLGSVNSAADESNKVCDIEMDG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03361 423 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 100 283 - -
Aip08g03361 423 MobiDBLite consensus disorder prediction 1 62 - -
Aip08g03361 423 CDD Snurportin-1_C 99 285 - -
Aip08g03361 423 MobiDBLite consensus disorder prediction 29 45 - -
Aip08g03361 423 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 422 IPR017336 GO:0005634|GO:0005737|GO:0061015
Aip08g03361 423 MobiDBLite consensus disorder prediction 1 28 - -
Aip08g03361 423 Gene3D DNA ligase/mRNA capping enzyme 2 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03361 Aip-Chr8 124903127 124906335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03361 K13151 - gmx:100801927 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03361 08 124903127 124906335 Aip08g03361 08 124903127 124906335 ECH