Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03340 ATGGAGGACTCACCGTCACCGTCGACATCGACATCGAGACAGAGCAAGAAGGCGGAACTTTCGAATGACGCTAACGTCACCGGGAACGGTGGAAGTTTCGGTTCGGTGAACGAGGACCTTCTCCAGAACATTCTGGCGAGGCTCCCGGCTCGTTGGTTCGCTTCCGCTGCTTGCGTCAGCAAATCATGGAGCTCTGTCTGCAATCGAATCCTTACTCGTCCAAAGCTCTCTTCTGCTCTTTCTCTCAATCCTTCACTTTCCGAAGCTGTAGATGATGTTCTTCAGAAGGTTCTGTGTGAGCCGATTCGGCCTCATTTTGCCATTGTCAATGTTGGAAGTGGATTTGACTTGGAGAAGATAATGCATCTTATAAGAAAGACCCTGGGATGCAACATTCCGATTATTGTTACCGTGTCAAATGGTATTATAGGAAGGGATGCACTCACTAGTGAATTTAAAGAGGTCAAATGGGGAGCCCTTTTTAGTGGTTTTGAGGGTGAATCTTACGCAAGAAATGTAAATGAAGGCATATTATTGACAGTTGGCTACCTTCCAGGATTAAAGGTTGAAGCTATACCATTACGGCATCCAACCCGGATATATTCATCAGTGTGTGTTGACGATTTTATAAAGGATATCAAGGAATATTCAGCCTCTGTCTCCAACTGCCCATTTCCAGTTGGGATTATATTATTTGGAAAAGCAAATGGTGACATGAATCCAGTTATGGAGAAGCTAGATTGTGCCATGCCAAGAGACACTGTTATTGTAGGTGATGAGAGGGGCTGCTTTATATACAGAAGTGGAAATGCTAAAAGGAATACAATTGGGTCCTTAGATGCTATTGCTCTTGTATTTGCTCAGGATAGAGACAGGTCTTCAGGAAATATTAAATTTCATGTTGCATTGTCAAATGGTGTTTCACCTGTGGGTACAACATACAAGGCAGCTTCAGTCAGAACAAGCAACACTGATTGTTCAACATGGTTAACTGCCAAGAGGGAAGGGCAACAACAACTTCTTGATGGTCAAAGTATTCTGGATGACATTAACAATTTGCTGGAAAATCATATTGCATCACCTGATTTGTACATTGGGGTGATTAAAAACAGAAAAGTCTCGATAGAAGGAGGGAAGCCAACACCAAGATCTTGTATTGCATATCATGGAGTTGTGGGAGGTGATGAAGAGTACCTCTACGTTGATGGAACTGGCATGAAAACAGGAGATATCTTCCAATTCTACTATTCTGATCCTAATGCCGCACAAGCTTCAGTTACTAAGGTCCATGATGCTCTGAAGAATATTAAGCTCAAGGGTGAAGGAAACAATAGTTGTGTTTTTGGGGGCCTTGTGTTTGCTTGTTATGGCCGCGGCGAATCATTCTTTGGATGTCACAATGTGGATAGCTCCCCGCTCTTAGAGTGTTTTCCAGGGCTACCAGTGGCCGGAGTATTTTGTGGCGGAGAAATCGTGCGTCCTTTTACTACTATGATTAGTCGAGAAGGAAGCCATGTTAACTGCTGTCTGCATGTTTACAGCTCTGTATATTTGGTAATGTCATATACCCCTCCATCTATGGGATGTTAG 1590 0.434 MEDSPSPSTSTSRQSKKAELSNDANVTGNGGSFGSVNEDLLQNILARLPARWFASAACVSKSWSSVCNRILTRPKLSSALSLNPSLSEAVDDVLQKVLCEPIRPHFAIVNVGSGFDLEKIMHLIRKTLGCNIPIIVTVSNGIIGRDALTSEFKEVKWGALFSGFEGESYARNVNEGILLTVGYLPGLKVEAIPLRHPTRIYSSVCVDDFIKDIKEYSASVSNCPFPVGIILFGKANGDMNPVMEKLDCAMPRDTVIVGDERGCFIYRSGNAKRNTIGSLDAIALVFAQDRDRSSGNIKFHVALSNGVSPVGTTYKAASVRTSNTDCSTWLTAKREGQQQLLDGQSILDDINNLLENHIASPDLYIGVIKNRKVSIEGGKPTPRSCIAYHGVVGGDEEYLYVDGTGMKTGDIFQFYYSDPNAAQASVTKVHDALKNIKLKGEGNNSCVFGGLVFACYGRGESFFGCHNVDSSPLLECFPGLPVAGVFCGGEIVRPFTTMISREGSHVNCCLHVYSSVYLVMSYTPPSMGC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03340 529 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 32 526 - -
Aip08g03340 529 SUPERFAMILY F-box domain 38 69 IPR036047 GO:0005515
Aip08g03340 529 SMART FIST_C_2 346 494 IPR019494 -
Aip08g03340 529 Pfam FIST N domain 115 319 IPR013702 -
Aip08g03340 529 Pfam FIST C domain 405 492 IPR019494 -
Aip08g03340 529 PANTHER F-BOX ONLY PROTEIN 22 32 526 - -
Aip08g03340 529 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03340 Aip-Chr8 124674775 124680479 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03340 - - gmx:100815778 728.013