Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03339 ATGGGAGAGGAAGAAAATAAACTAGAGAAAACAAAAGCAGCGGAAAAAGAGCAGCCAAAAGAACCAAAAAAGGCAGAAACAACTGTAGTAGAAGATAAAGGAGTAGAAAAATTGGTGGAAGAACCAAAATCCGAAGCCGCAGTTCTACCTGAAATTGTGCTAAGAGTGTTCATGCATTGTGAAGGTTGTGCCCGCAAGGTTCGTCGTTCACTGAAGGACTTTCCAGGGATAGAAACAGTGATAACAGATACTAAGTCTCAGAAAGCAGTGGTGAAGGGAGAAATAGCAGATCCACTTAAGATTGTGGAGAGAGTGCAGAAAAAGAGTCATAGAAAGGTGGAACTTCTGTCTCCAATTCCAAAACAGTCTTCATCAGAGGATGAGAAAAAATCACCAATAGAAGAAGAGAAGACCGAGCAAAAGAAACAAGAGATTATAACTGTTGTTCTGAAAGTTCACATGCACTGCGAAGCCTGTTCACAAGAAATCAAGCGACGAATACTCAAAATGAAGGGGGTGGAATCAGCTGAAGCAGATCTAAAGAATTCATTAGTCAGTGTAAAAGGCGCCATGGAAGCTTCGAAGCTTGTTGACTACGTATACAAGAGAACAGCAAGACATGCAGTGATAATAAGAGTAGAACCACAGGAAACATCAAAGATTCAAGAAGAAAAACCAACAAATTCAGAAGAAGAAAAGTCACAACAAGAACAAGTTGGTAGCACTGAAAATAACAAGAAAGAAGAAGAAAAGAAGAATAAAAAAGAAGAGAAAGTAGCTGAAGAAGAAATAAAACAAGAAGAGAAAGAAAAAAAGGAGGATAATAATAATAATAATAATAATAATAATAAAGAAAAAGAGACTATTAGTTTGACTAAAAATGAACATTACTATTACCCACCAAGACATGGCATGGAGTTGTATGCATATGCCTACAATTATAATTTTCCACCACCTCCACCTCCACCTCTTTCTCTTCTTAATAATGCACACCCTCTTTATTATCAAAACTATCCTCCTCAGATGTTCAATGATGAAAATCCAGATGCATGTAATGTTATGTAA 1065 0.369 MGEEENKLEKTKAAEKEQPKEPKKAETTVVEDKGVEKLVEEPKSEAAVLPEIVLRVFMHCEGCARKVRRSLKDFPGIETVITDTKSQKAVVKGEIADPLKIVERVQKKSHRKVELLSPIPKQSSSEDEKKSPIEEEKTEQKKQEIITVVLKVHMHCEACSQEIKRRILKMKGVESAEADLKNSLVSVKGAMEASKLVDYVYKRTARHAVIIRVEPQETSKIQEEKPTNSEEEKSQQEQVGSTENNKKEEEKKNKKEEKVAEEEIKQEEKEKKEDNNNNNNNNNKEKETISLTKNEHYYYPPRHGMELYAYAYNYNFPPPPPPPLSLLNNAHPLYYQNYPPQMFNDENPDACNVM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03339 354 MobiDBLite consensus disorder prediction 218 289 - -
Aip08g03339 354 Gene3D - 142 211 - -
Aip08g03339 354 CDD HMA 149 189 IPR006121 GO:0046872
Aip08g03339 354 MobiDBLite consensus disorder prediction 218 232 - -
Aip08g03339 354 MobiDBLite consensus disorder prediction 112 138 - -
Aip08g03339 354 ProSiteProfiles Heavy-metal-associated domain profile. 58 114 IPR006121 GO:0046872
Aip08g03339 354 Gene3D - 46 122 - -
Aip08g03339 354 Coils Coil 232 285 - -
Aip08g03339 354 MobiDBLite consensus disorder prediction 1 28 - -
Aip08g03339 354 Pfam Heavy-metal-associated domain 150 197 IPR006121 GO:0046872
Aip08g03339 354 Pfam Heavy-metal-associated domain 53 108 IPR006121 GO:0046872
Aip08g03339 354 MobiDBLite consensus disorder prediction 242 280 - -
Aip08g03339 354 CDD HMA 58 114 IPR006121 GO:0046872
Aip08g03339 354 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 354 IPR044577 GO:0046872
Aip08g03339 354 SUPERFAMILY HMA, heavy metal-associated domain 54 108 IPR036163 GO:0046872
Aip08g03339 354 SUPERFAMILY HMA, heavy metal-associated domain 147 202 IPR036163 GO:0046872
Aip08g03339 354 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 354 - -
Aip08g03339 354 MobiDBLite consensus disorder prediction 123 138 - -
Aip08g03339 354 ProSiteProfiles Heavy-metal-associated domain profile. 154 187 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03339 Aip-Chr8 124644413 124646326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03339 - - adu:107463469 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03339 08 124644413 124646326 Aip08g03339 08 124644413 124646326 ECH
Aip03g03267 03 106956095 106958155 Aip08g03339 08 124644413 124646326 PCT