Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03338 ATGGTGGCATCCATCAATTTAGGGTTACAATTTCCATGTAGCTTGAGCAACAATGTGGTTAAGCTAGGGTTTCATTCTTCATCACCATCACCTAATAATAAGAGAAGAGTTTCATTAATGGTGAATGCAAATTCTAATAGAAGATTAGGAGGAACAATAAATAATGGAGAAAATAATAACATAAATAATAAAAATTATAAGGTGAATGGGGTGCGTGTGGCAGAGGCTCCTCTGACTTTGAGAAAATTAAAGGAAGATTCAGCAGAGGAAGCTCTTGTAACTTGCATGCATGGAAGGTTTCAGGAGGGTATTTTCGTCTATAGGCAGATTTTTGCTATAAGGTCTTATGAGATTGGACCAGATCAAACTGCTACTATGGAGACCATCCTCAATTTTCTTCAGGAAACTGCTCTAAATCATGTGGCGAACTCTGGAATAGGTGGGATTGGATTTGGAGCAACACGCCAGATGAGCATTCGAAAACTCATCTGGGTTGTTACTCGCATTCAGGTTCAAGTCCAGAGATATAGCAGTTGGGGAGATATAATTGAAATTGATACTTGGGTTGATGCACATGGAAAGAATGGAATGCGCAGAGATTGGGTAATTAGAGATCACTTCACTAAAGAAGTCATTGTAAAAGCTACAAGTACGTGGGTGATGATGAATAGAGAAACAAGAAAACTTTGCAAGATACCTGAAGAAGTAAGGGAAGAGCTTACTCCATTTTATATTAATAGGTTTGCTATTTCTAATGAAGACACAGATTCTGAAAAGATTCACAAGCTTACTGATCAAGATGCTGAGAACATCCAAACTGGATTGGCTGTAAGTTTTCtttacatgatttttataTCCTTGCCAATGAAAGTGCTAGAAGATTATTACATGACAAGCATGACATTGGAGTTTAGGAGAGAGTGTACACAATCTAACATGTTGGAATCAATGGCGACTCCAACATCAAAGCTCATTCATGGAAACAATTCCATCAATATAAAAGTAAACAGCAATTTGCAATTCACACACTTGCTTCGTCTTTTAGATGATGATCAAAGACCTGAAGTTGTTAGAGCCAGAACTGAATGGCATTTCAAGAACTATGCTAATTCAATTTAA 1119 0.3691 MVASINLGLQFPCSLSNNVVKLGFHSSSPSPNNKRRVSLMVNANSNRRLGGTINNGENNNINNKNYKVNGVRVAEAPLTLRKLKEDSAEEALVTCMHGRFQEGIFVYRQIFAIRSYEIGPDQTATMETILNFLQETALNHVANSGIGGIGFGATRQMSIRKLIWVVTRIQVQVQRYSSWGDIIEIDTWVDAHGKNGMRRDWVIRDHFTKEVIVKATSTWVMMNRETRKLCKIPEEVREELTPFYINRFAISNEDTDSEKIHKLTDQDAENIQTGLAVSFLYMIFISLPMKVLEDYYMTSMTLEFRRECTQSNMLESMATPTSKLIHGNNSINIKVNSNLQFTHLLRLLDDDQRPEVVRARTEWHFKNYANSI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03338 372 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 37 367 - -
Aip08g03338 372 Gene3D Hotdog Thioesterase 99 369 - -
Aip08g03338 372 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 106 249 IPR029069 -
Aip08g03338 372 CDD 4HBT 105 223 - -
Aip08g03338 372 Pfam Acyl-ACP thioesterase 106 364 IPR002864 GO:0006633|GO:0016790
Aip08g03338 372 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 37 367 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03338 Aip-Chr8 124632804 124637663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03338 98 366 Acyl Lipid Metabolism Gene Families AT1G08510 45.230 5.64e-83 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03338 K10781 - gmx:100791281 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03338 08 124632804 124637663 Aip08g03338 08 124632804 124637663 ECH