Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03336 ATGGCTGGCAATAAGTTGTGGACTTTGCTCACACACCTTCATTCCCTTGCTGGGCCGGTTTTGACGCTAGTGTACCCTTTGTATGCATCGGTGGTAGCCATAGAATCTCCATCAAAGGTAGATGATCAACAGTGGCTTGCTTATTGGATCATCTATTCGTTTCTCACACTTGCGGAAATTGTTCTTGAATCTCTTTTAGAGTGGGTTATAATTTGGTATGACGTGAAGTTATTATTTGTGGCATGGTTGGTATTGCCACAATTCATGGGTGCTGCTTTCTTGTATGAGAGGTTCGTCAGAGAGCACATACGAAGATATGTTACTGGAAGGGGCCAGGCCCACAACCATCCCAGTTTGATCCAGGCCCAGCCCAAGATTCACAAGCAACAAACCAAGAAATCTCCCACTGGGTCCAAGCCCAGGAAGAAGTTTGTTGACTTTATCATACCCAAGAAAGTTGATGGAGATAAAAATAAGATTAGGATCAGAGAGATGAGAGGAGCAAAAATTGGGGTAAGAGGTGAGAAAGAGGTGATTTGA 540 0.4389 MAGNKLWTLLTHLHSLAGPVLTLVYPLYASVVAIESPSKVDDQQWLAYWIIYSFLTLAEIVLESLLEWVIIWYDVKLLFVAWLVLPQFMGAAFLYERFVREHIRRYVTGRGQAHNHPSLIQAQPKIHKQQTKKSPTGSKPRKKFVDFIIPKKVDGDKNKIRIREMRGAKIGVRGEKEVI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03336 179 PANTHER HVA22-LIKE PROTEINS 3 123 IPR004345 -
Aip08g03336 179 Pfam TB2/DP1, HVA22 family 26 101 IPR004345 -
Aip08g03336 179 PANTHER HVA22-LIKE PROTEIN 3 123 IPR031117 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03336 Aip-Chr8 124616223 124619499 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03336 K17279 - gmx:100813655 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03336 08 124616223 124619499 Aip08g03336 08 124616223 124619499 ECH