Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03330 ATGCCGGAAGAGGAGTTGGTGGACATAAAGTTCAGATTGTACGATGGGTCTGATATGGGGCCATTCAGGTACTCTTCAGCAGCCACAGTTGATGTTCTTAAACAAAGGGTTGTCTCAGATTGGCCAAAAGGCAAAACAGTCACCCCAAAGGCAGCAAATGAAGTGAAATTGATTAATTCTGGTAAAATATTGGAAAACAACAAGACTGTTGGTCAATGTAAAGTACCATTTGCTGATGTTGCAGGCGGTGTCATAATAATGCATGTTGTTGTACAGCCATCTCCTGCAAAAACAAAACCTGAAAAGAAGATAGATGATTCACCCAAGAAGATTGTCTGTGCTTGTTCCATTTTGTGA 357 0.409 MPEEELVDIKFRLYDGSDMGPFRYSSAATVDVLKQRVVSDWPKGKTVTPKAANEVKLINSGKILENNKTVGQCKVPFADVAGGVIIMHVVVQPSPAKTKPEKKIDDSPKKIVCACSIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03330 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Aip08g03330 118 CDD Ubl_MUBs_plant 6 93 - -
Aip08g03330 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Aip08g03330 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Aip08g03330 118 Gene3D - 1 100 - -
Aip08g03330 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 118 - -
Aip08g03330 118 PIRSF MUB 1 118 IPR017000 -
Aip08g03330 118 SUPERFAMILY Ubiquitin-like 2 98 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03330 Aip-Chr8 124550795 124557454 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03330 - - twl:119985138 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03330 08 124550795 124557454 Aip08g03330 08 124550795 124557454 ECH