Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03327 ATGCCACACAGTCCTTTAGTTTTCACCTTTGGAATTCTAGAANNNNNNNNNNNNNNNNNTAGAGTATGCAAGAAGAAATCAACAGAAGGATTCCAATCAATTCCATATGTGGCAGCACTCTTCAGTGCAATGCTTTGGATCTTCTATGCCTATGTCAAAACCGGAGAAACTCTTCTTATCACAATCAATGCATTTGGTTGTGTCATTGAGACTATTTACCTTGCCATTTTCATCACTTACTGCCCCAAGAAAGTTAGGCTTTCTACAATCAAGATTATTCTGTTGTTGAATGTGTTTGGATTTGGAGCTATAGTTCTATCAACCTTATATCTTACAAAAGGAGACAAACGTGTTACAGTTATAGGATGGTTTAATCTCATCTTAAACATTTGTGTATTTGCTTCTCCTCTTGGCAGCTTGAGACGTGTGGTGAAGACAAAAAGTGTGGAATTCATGCCATTTACTTTGTCTTTCTTTTTGACCTTAAATGCAGTCATGTGGTTCTTCTATGGTCTTCTTCGTCATGACTATTACATTGCTCTTCCAAATACACTTGGATTTTTGTTTGGAATTATTCAGATGGTGATGTACATGATTTATAGGAAGAACAAGAACGTGGTGTTAGAAGAGCCAGTAAAATTGCAAGAACTCAATAATAATAATAATAATAACAACAATGGACATGTAATTGATGTTGTGAAGCTTAGCACAATGGTACCCTCAGAACCAAATCATGTAGCTGTGAATGTGACACTTGTTGAGGACATAAATGGAAATAATCAAGAAGATCATCATGATGATAACCTCCACAACAAGAACCAAGTGTGA 828 0.3539 MPHSPLVFTFGILEXXXXXXRVCKKKSTEGFQSIPYVAALFSAMLWIFYAYVKTGETLLITINAFGCVIETIYLAIFITYCPKKVRLSTIKIILLLNVFGFGAIVLSTLYLTKGDKRVTVIGWFNLILNICVFASPLGSLRRVVKTKSVEFMPFTLSFFLTLNAVMWFFYGLLRHDYYIALPNTLGFLFGIIQMVMYMIYRKNKNVVLEEPVKLQELNNNNNNNNNGHVIDVVKLSTMVPSEPNHVAVNVTLVEDINGNNQEDHHDDNLHNKNQV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03327 275 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 20 253 - -
Aip08g03327 275 Gene3D - 6 91 - -
Aip08g03327 275 Gene3D - 116 210 - -
Aip08g03327 275 Pfam Sugar efflux transporter for intercellular exchange 120 205 IPR004316 GO:0016021
Aip08g03327 275 Pfam Sugar efflux transporter for intercellular exchange 20 84 IPR004316 GO:0016021
Aip08g03327 275 PANTHER RAG1-ACTIVATING PROTEIN 1 20 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03327 Aip-Chr8 124473475 124527943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03327 21 273 Miscellaneous Gene Families AT5G50790 46.792 1.42e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03327 K15382 - gmx:100794434 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03327 08 124473475 124527943 Aip08g03327 08 124473475 124527943 ECH