Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03316 ATGGCGGAGCATATTCCGGCGCCGGAGGCTCAGGTCAACGGCGGAGGAACGCTCCCTCCGGCGAACCCCTCCGAGCAACTAATCGCATCGAAGCGCCAGAGAAGGCCAAGTGTCCGATTGGGCGATATCGGAGGAGACCAACACTACGATACGCACCCTCGACGGAGCACCAAGCCATGGCGGATCCCCTTCGACGGCCACCACCAGCACCACCACATCCGCAAGGACAATCCAGGTAAACCCTCCAAAACTCGTCCTTTAACCAATTTGAGCTCCGGTGGCGGCGCCGCAGAGTTCGGCGAAACCCTAGAGGGCGAAGAGCGCGAAGGGAACATCGATAGCGTTGTGATTGGTAGCTGGAAGGTGAAGGATTCAAAGAAACGAGGAGCGAAGAGGGTTAGATCGAACTGGGTTTCGAGAATCGACGACGGCACCAGCGTCGGCGGTGGCGGTGGCTCTGGCGGTGGAGATGGAGATGGAGATGGAGAAGGAGAAGATAAGTATAGTGGCGGCGAGGATGTCGACGACGGGTATCGGGATTTCGATGTGGAGAATACAGAGAGCCCTTTGAAGGATCAAAGCCCTTTGAATTCAATGGAGAATCTGGATTTTCAGGGTAATAGGAGGAACATTAGGGTTAGGGTTTCAGAGGGTGCAAGGGAGCACCTTGATGGGGTTGAACTTTCTGGGCCTTCGGATAATAACGGTATTGTTAGGGAAAATAATAATAGGAATGGGAGAGGAAGGTATATTGGTGACGGTAATGGTGAAGATGGTGTTAGAGTTTGGCTCAATGGGTTAGGGTTAGGTAGGTATGCACCTGTGTTTGAAATTCATGAGGTGGATGATGAGGTTCTTCCATTGTTGACTCTTGAGGATCTCAAAGATATGGGGATCAATGCTGTTGGGTCAAGAAGGAAAATGTACTCTGCAATTCAGAAGCTTGGAAAAGGGTTCTCCTGA 963 0.5202 MAEHIPAPEAQVNGGGTLPPANPSEQLIASKRQRRPSVRLGDIGGDQHYDTHPRRSTKPWRIPFDGHHQHHHIRKDNPGKPSKTRPLTNLSSGGGAAEFGETLEGEEREGNIDSVVIGSWKVKDSKKRGAKRVRSNWVSRIDDGTSVGGGGGSGGGDGDGDGEGEDKYSGGEDVDDGYRDFDVENTESPLKDQSPLNSMENLDFQGNRRNIRVRVSEGAREHLDGVELSGPSDNNGIVRENNNRNGRGRYIGDGNGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGINAVGSRRKMYSAIQKLGKGFS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03316 320 SUPERFAMILY SAM/Pointed domain 257 315 IPR013761 -
Aip08g03316 320 ProSiteProfiles SAM domain profile. 255 318 IPR001660 GO:0005515
Aip08g03316 320 MobiDBLite consensus disorder prediction 17 31 - -
Aip08g03316 320 MobiDBLite consensus disorder prediction 1 107 - -
Aip08g03316 320 CDD SAM_superfamily 260 314 - -
Aip08g03316 320 SMART SAM_4 252 318 IPR001660 GO:0005515
Aip08g03316 320 MobiDBLite consensus disorder prediction 123 201 - -
Aip08g03316 320 PANTHER - 6 320 - -
Aip08g03316 320 MobiDBLite consensus disorder prediction 160 187 - -
Aip08g03316 320 PANTHER SCP160 6 320 - -
Aip08g03316 320 Gene3D - 255 315 IPR013761 -
Aip08g03316 320 MobiDBLite consensus disorder prediction 35 72 - -
Aip08g03316 320 Pfam SAM domain (Sterile alpha motif) 256 315 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03316 Aip-Chr8 124372010 124373492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03316 - - aprc:113856178 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03316 08 124372010 124373492 Aip08g03316 08 124372010 124373492 ECH