Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03305 ATGCAACTACCTCTTGACTATGTTGGGACTGTTGTGCATCGGATTACTGTTTTGGGTTGTTGGGTTATTAGCACCAGGATTTGTTGGTTCTGTGGTCTTGGGTGCAATTTCATTCTCCATATTGTAACCTTGATACTCACTCACTGCGCCTCAATCAGTGAACAACACCACACTCCATGGGGAAAGATAACCACCCTTCCGCTATGGAAATCGACGATCCTAAATCCGCCAATTCCGATCAGATTGTTCCCAAGTTCTCCATCAATGCTCTTGAAATCGGCACAAATGCAGCACGGTTTGCGGCATGGAGATTACACTCGATATCGGAGGTATTGCACAGCTCGTTTGAGGAGGTTATATAAATCATTGAAGTTTACTCATGGTCGAGGCAAATATTCAAAAAGAAACATAACCGAGAGTACCGTCACTGACGTAAGGTTTCTTCATGTGCTTCTATATTCGGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGACAGCTTCCAGATGGCCCAAATGCACGTCAACGTATCTATTTGATTGGCAGGCTACGGAAAGCTGTAAAATGGGCTACTTTGTTTTCAAAATTATGTGCCATCAAGGCAGATTCAAGAACATCTCTTGAAGCTGAGGCCTATTCATCCTATATGAAGGGTAATTTGTTGTTTGAACAAGATCAGAACTGGGATGTGGCTTTAATGAGCTTCAAAAGTGCCAGGGCTGTATATGAGGAATTAGGGAAATATGGAGATTTGGATAATCAAGTTTTGTGCCGTGAGCGAGTTGAGGAACTGGAACCTAGTATACGATATTGCCTTCATAAAGTTGGCCAGTCAAATTTACAGACCTCTGAACTTTTGAACATTGGTGACATGGAAGGTCCTGCATTAGACCTTTTTAAAGCAAAGTTGGAGGCTGTTATGGCAGAAGCAAGATCACAGCAGGCTGCTTCCATGACAGAGCTCAATTGGCTTGGCCATAGGTTTCCAGTATCAAATGCAAAAACAAGGGTTGCCATTTTAAAAGCTCAAGAGCTCGAGAAGGATTTACATGGTTCATCGGCAGACTCAACTCCATCAGACAAGAAACTTGTTATTTTTGACAAAATATTTTCTGCGTATCACGAAGCCAGAGGTTATATTCGAGCTGATTTGGCCACTGCAGGAAATGCAGAAAACGTGAAGGATGATTTGCATGGTCTTGACAAGGCTGTCAGTGCCATGTTGGGAGAAAGAACTATTGAGCGCAACCTTCTGTTGGTTAAGGTTGCAAAAAGTAAACTTGCTAGGCGTCGTGATGATAAAAATGATAAAGTCACCAAACCTGAAGAGCTTGTTCGTTTATATGATCTCTTGCTACAGAATACAGCCGATCTTTCCGATTTAGTCAGTTCAGGAAGGGATAAAAAGCCAGAAGAAGTGAGCTTTGCTGATGAGTGTGCATGCAAAACCTTGGCTTTTAGAGCAGAAAGGTGCTTTTATGTGGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCCTATGCTTTGTATCATCATGTTCGCAACTTAGCAGAGGATGCCTTAAGAAAGTTTAAATCGTTAAACGGTGACTATAAGAATATGATAAAAGACCTGGAGGAGTTGTGCAAGCAGTGCAGATCTAACAGTTGTATAGAACATGCCTTGGGGATCATGGAAGAGAATAAGGATCAAGAAAACATCTCTGAAAGGATCTCCAATATATCATTGACCGGGGCTGAGCGGTTGGAGAAATTCCTCCTTGATAAACTTGATGTTTATGAGTCTGCTGTTGGCGATTCCAATGTAAAATGTGCTCCCCGCATTGCATCCTTCCCCCCACCTTTCCAGGCCATTTCGCGCACTCCAATCGTGTTGGACCTGGCTTATAACAACATTGAATTCCCATCTCTTGAGAGTAGGATGAAAAAACAAAAGGGCGGCTTCATGAGTAGAATATGGGGATGA 1971 0.4282 MQLPLDYVGTVVHRITVLGCWVISTRICWFCGLGCNFILHIVTLILTHCASISEQHHTPWGKITTLPLWKSTILNPPIPIRLFPSSPSMLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYSKRNITESTVTDVRFLHVLLYSAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFSKLCAIKADSRTSLEAEAYSSYMKGNLLFEQDQNWDVALMSFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKVGQSNLQTSELLNIGDMEGPALDLFKAKLEAVMAEARSQQAASMTELNWLGHRFPVSNAKTRVAILKAQELEKDLHGSSADSTPSDKKLVIFDKIFSAYHEARGYIRADLATAGNAENVKDDLHGLDKAVSAMLGERTIERNLLLVKVAKSKLARRRDDKNDKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFADECACKTLAFRAERCFYVAKSYSVAGKRAEAYALYHHVRNLAEDALRKFKSLNGDYKNMIKDLEELCKQCRSNSCIEHALGIMEENKDQENISERISNISLTGAERLEKFLLDKLDVYESAVGDSNVKCAPRIASFPPPFQAISRTPIVLDLAYNNIEFPSLESRMKKQKGGFMSRIWG 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03305 656 Gene3D - 86 278 IPR038253 GO:0003723
Aip08g03305 656 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 90 655 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Aip08g03305 656 Pfam RNA-binding signal recognition particle 68 100 634 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Aip08g03305 656 CDD SRP68-RBD 86 274 IPR034652 GO:0003723
Aip08g03305 656 PIRSF SRP68 85 651 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03305 K03107 - gmx:100816486 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03305 08 124118769 124128122 Aip08g03305 08 124118769 124128122 ECH