Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03302 atgggggacgatccggcacggttatatcggttggacggagtcgttcatatagccggggtcatcaacgacgagGATGCGTGCGTTCAAAATGTGCTGGATTCGCTTGTGCCAGCATTGTTGGCGGACAAGAATCGCAGGCTTATATATGTTGAACAGGCATTTTTCCAGCGTTGGTGGAGAGAACAAAGTGAAGTTGTTCAGAACATAGTCAAACAGCTGGTCAACTCTGGTCAATTGGAGTTCATAAATGGGGGTATGGTTATGCATGATGAGGCTACTACACATTACATTGACATGATTGATCAAACAACACTTGGACATCATTTCATCAAAGAAGAATTTGGTAAAACCCCAAGAATAGCCTTGGTTGATAAATGGGAGAGTTTCCATTGGACAACATCTCCAACGCAAAACTCTCATAGCCCTTATTCATTGAGAGTGTTACGTTGGAGATGTTGTCCAATGGAAACTCTCCCATTTATCAACCAAGGCTATGAGCATAGCTCCAGCATTGTAGAAGTCTGGCATGGAAAAAAGGTTTGCAAGGACAGTAACGGTGTGATGTTTCTTTTGTTCAGTCTTGAAACTCTTGCCAATAAATCGCAGAAATTCATCCCCAATTTACTCGCAAGAGTTTGA 639 0.3678 MGDDPARLYRLDGVVHIAGVINDEDACVQNVLDSLVPALLADKNRRLIYVEQAFFQRWWREQSEVVQNIVKQLVNSGQLEFINGGMVMHDEATTHYIDMIDQTTLGHHFIKEEFGKTPRIALVDKWESFHWTTSPTQNSHSPYSLRVLRWRCCPMETLPFINQGYEHSSSIVEVWHGKKVCKDSNGVMFLLFSLETLANKSQKFIPNLLARV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03302 212 PANTHER ALPHA-MANNOSIDASE 24 121 - -
Aip08g03302 212 Pfam Glycosyl hydrolases family 38 N-terminal domain 25 121 IPR000602 GO:0004559|GO:0006013
Aip08g03302 212 Gene3D Glycoside hydrolase 38, N terminal domain 3 126 IPR027291 -
Aip08g03302 212 PANTHER ALPHA-MANNOSIDASE 24 121 - -
Aip08g03302 212 SUPERFAMILY Glycoside hydrolase/deacetylase 26 137 IPR011330 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03302 Aip-Chr8 124079776 124084211 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03302 26 121 Glycoside Hydrolase AT5G13980 78.125 3.54e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03302 K01191 - zju:107427985 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03302 08 124079776 124084211 Aip08g03302 08 124079776 124084211 ECH