LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g03231	ATGCAATCGTCCCGTAGCCACAATGAAAACGCCGCCGAACAGTCATCGGCACCGTCGCGACCCCGCCCCACCTTCCGATCGCTCTCGGCGGTGGGATCTTCGTCTTCGTCGTCACCCTCACCGGCCTTAGGCCGCAACGTGAAGCGATCAATCTCCGCTTCCGCGAGATTTCCGCGCCAAAACAGTATGGCTCGCGAGGTGGTGCTAAACGACGTCGTTGGNNNNNNNNNNNNNNATTTAACGAATGACGAGAGGAGGTTCTCAATAAGCACCGGAACCAAGAAGAGGCTGCACCTTAGGGCTGAGAGCAGGGATGACCGAGAAGTTTGGGTGCAAGCCATTATGGCCGTTAAGGAAATGTACCCTCGTCTCTCCAACAAAGAGATCATGGCCCCTGTTGCCTCCGTCGCCGACTCTACTAGCAAGCTTCGCCAACGCCTTCTTGAGGAAGGCGTCAGCGAAGCCGCCATTCGAGACTGCGAGGATATTATGGGAGCTGAAGTCTTGTACTTGCGGAAGCAAATTGTTGCTCTCAAGCATAAGCAGTTGATGCTAATGGACACACTCCGCCATCTTGAGACAGAGAAGGTTGACCTGGAGAACACACTTGTTGACGACATAAAATCAAAGGATAATGATCCCTCCTATCATTCTTCTCATGAAAAATATAGTGATGGAAGTGTGAGTGATTCTTCAGATGAGCATGATAGACATGAAGATCAATTTGATGATGAACATAATGATGCATTCTTTGACACACAAGATTTTCTTTCTATAAGCCATGACTCTGAGGAAGAAGAAGAAGAAGATGAGGACTATGATGAAAATACTCCAAATGAAAGTGAAAAATCTTCAAGAAGACTTAGTTGTGTTGGATTGTACAAGTATCCAAAAGTGAAGAGGAGAACAAAGTTGCCAGAACCAGTTGAGAAGGAAAGTGGAGTGAGTCTATGGTCAATAATAAAAGAAAACATAGGAAAAGATCTTACAAAAGTGTGTCTTCCTGTTTACTTCAATGAACCACTCTCATCATTGCAAAAGTGTTGTGAAGATATGGAGTACTCTTACCTTCTAGACCGAGCATCTGAATGGGGTAAAATGGGTGATAGTTTGATGAGGGCACTCCATGTAGCAGCATTTGCAGTTTCAGGGTATGCAAGCACCAGTGGTAGAAGTTGCAAACCTTTTAACCCATTGTTGGGTGAGACTTATGAGGCTGATTTTCCAGACAAAGGTTTTCGCTTTATCTCTGAGAAGCCTCCATTCACCCAGCAAGGCCACCATTCGCCACCGACAACCATCGACAGCAGCCGCGACCACCACCGGCCGAGCCCGCCTCCTCGTCGCCGAACGTCACCTAGCCCGACCCTCATTCGCCACCCACAACCATCCACAGCAGCCGCGACCACCACCGGCCGAGCCCGCGTCCTTCTGAATTCGGTAAGACTCTGTTCTATGCTCCTTCTTGATTTTGGATTTTGA	1482	0.4784	MQSSRSHNENAAEQSSAPSRPRPTFRSLSAVGSSSSSSPSPALGRNVKRSISASARFPRQNSMAREVVLNDVVXXXXXXLTNDERRFSISTGTKKRLHLRAESRDDREVWVQAIMAVKEMYPRLSNKEIMAPVASVADSTSKLRQRLLEEGVSEAAIRDCEDIMGAEVLYLRKQIVALKHKQLMLMDTLRHLETEKVDLENTLVDDIKSKDNDPSYHSSHEKYSDGSVSDSSDEHDRHEDQFDDEHNDAFFDTQDFLSISHDSEEEEEEDEDYDENTPNESEKSSRRLSCVGLYKYPKVKRRTKLPEPVEKESGVSLWSIIKENIGKDLTKVCLPVYFNEPLSSLQKCCEDMEYSYLLDRASEWGKMGDSLMRALHVAAFAVSGYASTSGRSCKPFNPLLGETYEADFPDKGFRFISEKPPFTQQGHHSPPTTIDSSRDHHRPSPPPRRRTSPSPTLIRHPQPSTAAATTTGRARVLLNSVRLCSMLLLDFGF	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g03231	493	MobiDBLite	consensus disorder prediction	261	277	-	-
	Aip08g03231	493	MobiDBLite	consensus disorder prediction	412	465	-	-
	Aip08g03231	493	Gene3D	-	53	121	IPR011993	-
	Aip08g03231	493	MobiDBLite	consensus disorder prediction	207	245	-	-
	Aip08g03231	493	ProSiteProfiles	PH domain profile.	1	119	IPR001849	-
	Aip08g03231	493	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	82	419	IPR000648	GO:0008289
	Aip08g03231	493	MobiDBLite	consensus disorder prediction	1	47	-	-
	Aip08g03231	493	PANTHER	OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C	82	419	-	-
	Aip08g03231	493	Pfam	Oxysterol-binding protein	316	419	IPR000648	GO:0008289
	Aip08g03231	493	MobiDBLite	consensus disorder prediction	258	284	-	-
	Aip08g03231	493	SUPERFAMILY	PH domain-like	66	126	-	-
	Aip08g03231	493	SUPERFAMILY	Oxysterol-binding protein-like	311	423	IPR037239	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g03231	Aip-Chr8	123133032	123140608	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g03231	K20456		-	jre:109012768	431.409