Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03167 ATGATCGAAAAAGTAGAATCCTTGAAAAACACTTCTTCCACTACCCTTGGCATCTCTAAAGAACTCTGCGACGACGACGGCCGTCCACAACGAACCGGAACTGTATGGACAACAAGTTCTCATATAATAACAGCAGTGATTGGATCTGGAGTTTTATCATTAGCATGGTCAATAGCACAATTAGGCTGGATTGCTGGCCCTATTATTATGATCTTCTTTAGTCTCGTCACTTTGTATACTTCATATTTTCTTGCAAATTGTTATCGTGCTGGAGACCCTATTACTGGCAAGAGGAGCTACACTTACATGGAAGCCATTGGCAACATTCTTGGAGGAAAAAATGTTTATTTTTGTGGAATAATACAATATGCAAATCTTTATGGAACTACAATAGGATATACAATTGGGGCCTCTCTTAGCATGATGGCAATAACAAAGATTCATTGCATATACTCATCTGAAGGAAAAGACCCATGTGTTATTTATGGCAACCCTTATTTAATGGGGTTTGGAATAATCCAACTTGGTTTTTCTCAACTTCCTGATTTTCATAATATTTCATGGCTCTCAATACTTGCTGCAGCCATGTCCTTCACATATTCCATAATTGGTCTCATCCTTGGAATTATCAAAATTGCAGAAAATGGTACTGTAATGGGTACCCTAGCAGGAGCTAAAGGAGAATTACCGATTGATAAAGTGTGGGGGATATTTCTAGCTCTTGGAAACATTGCCTTTGCATATTCATATTCTTTTATTCTCATTGAAATTCAGGATACCATAAAGTCTCCTTTTGAACTAAAAACAATGATGTTTGCTACAAGGATAAGCATTGCAACAACAACAACATTCTATGTCTTATGTGGATGCATAGGTTATGGTGCATTTGGAAACTCAGCACCAGGAAATTTACTTACAGCATTTGATAATCCAATTTGGCTTATTGACATTGCAAATTTAGCACTAGTCATTCACCTTGTGGGAGCATACCAAGTTTATTCCCAACCCCTCTTTGCATTTGTTGAAGAACATGCATCTAAGAGATGGCCAAGTCTTGAAATTGAACACAAGGTGGAAATACCATTTTTACCCTCTTTCAAACTAAACAAATTGAGACTAGTTTGGAGATCATTTTTTGTTGTGGTAACAACTTTTATATCAATGTTGGTTCCATTCTTTAATGACATAATGGGAGTGATTGGAGCATTAGGATTTTGGCCCTTAACAGTTTATTTCCCTGTGGAGATGTACATCAAACAAATGAAAATCCAAAAATGGAGTGAGAAATGGATTGGTTTACAATGTTTGAGTATGTTTTGTCTCTTAGTAACACTTGCTGCTCTTGTTGGATCAGTGGTTGGTGTCTTGCTTGACCTTTCAAAATTCAAGGCATTCAGCTCACAATTATAG 1410 0.3695 MIEKVESLKNTSSTTLGISKELCDDDGRPQRTGTVWTTSSHIITAVIGSGVLSLAWSIAQLGWIAGPIIMIFFSLVTLYTSYFLANCYRAGDPITGKRSYTYMEAIGNILGGKNVYFCGIIQYANLYGTTIGYTIGASLSMMAITKIHCIYSSEGKDPCVIYGNPYLMGFGIIQLGFSQLPDFHNISWLSILAAAMSFTYSIIGLILGIIKIAENGTVMGTLAGAKGELPIDKVWGIFLALGNIAFAYSYSFILIEIQDTIKSPFELKTMMFATRISIATTTTFYVLCGCIGYGAFGNSAPGNLLTAFDNPIWLIDIANLALVIHLVGAYQVYSQPLFAFVEEHASKRWPSLEIEHKVEIPFLPSFKLNKLRLVWRSFFVVVTTFISMLVPFFNDIMGVIGALGFWPLTVYFPVEMYIKQMKIQKWSEKWIGLQCLSMFCLLVTLAALVGSVVGVLLDLSKFKAFSSQL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03167 469 Pfam Transmembrane amino acid transporter protein 31 456 IPR013057 -
Aip08g03167 469 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 15 463 - -
Aip08g03167 469 PANTHER OS05G0424000 PROTEIN-RELATED 15 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03167 Aip-Chr8 122245084 122267599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03167 24 467 Organic Solute Cotransporters AT5G63850 60.927 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03167 K24917 - gmx:100817699 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03167 08 122245084 122267599 Aip08g03167 08 122245084 122267599 ECH