Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03146 ATGGCTTTGAAAACTTGCTTCACTCTTCTCCACCATTCACAACACTCTTCTTCCAGAATCTTCTTCTCAATCCCCTTTTTCAATTCTGCTACCTGCATTCTTCACAATGAACCTCACAACAACCACATCCTGCATTTCTCAACATTTTTTACTAAGAGGAAGCTCAATCTTGCTCTTCTTCTCACAACTTTTCTTTCGAGCAATTTATCAAACACTAGTGGTGCATTGTTGATGGCTCAAGAGTTGGACTTGGAGCTTCACAGATACACTGATTCCAAGGAAGGTTTCACTCTTCTTATACCCTCTTCTTGGACTAAGGTTGATAAAGCTGGGGCAACTGCTCTGTTTCAAGATGCAAGTATGGGGAGCAACAACATTGGGGTTGTCGTGAACCCAGTTCGTCTTGCAAATCTTGGAGACTTTGGGAGCCCCGAGTTTGTAGCTGATAAGCTTTTACAAGCAGAAAGGCGTAAGGAAAGTACAAAGGAAGCTGAATTAATTGCAGCTTCAGAAAGATCAGGAAATGGAGGTTTGCAAATTTATGAATTTGAATATACCATTGATAGTACTCGTGGAGGAAAGAAGAGGATATTTTCTGCAGCATTTGTGACCTCAAAGAAACTCTATCTTCTTAACATTGTTCATTCTGATAAACCAGAGAATCCTCTTGAACCATATAAAAGAATGATTTTAGAGCAAGTTCTCCATTCCTTTAATGCAGCAGCTTAA 729 0.3978 MALKTCFTLLHHSQHSSSRIFFSIPFFNSATCILHNEPHNNHILHFSTFFTKRKLNLALLLTTFLSSNLSNTSGALLMAQELDLELHRYTDSKEGFTLLIPSSWTKVDKAGATALFQDASMGSNNIGVVVNPVRLANLGDFGSPEFVADKLLQAERRKESTKEAELIAASERSGNGGLQIYEFEYTIDSTRGGKKRIFSAAFVTSKKLYLLNIVHSDKPENPLEPYKRMILEQVLHSFNAAA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03146 242 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC 31 241 - -
Aip08g03146 242 Pfam PsbP 86 239 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aip08g03146 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 77 239 - -
Aip08g03146 242 SUPERFAMILY Mog1p/PsbP-like 87 240 IPR016123 -
Aip08g03146 242 PANTHER - 31 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03146 Aip-Chr8 121683602 121685643 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03146 - - aip:107641317 410.994