Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03143 ATGCTCGGAACGCCATTCTCATTCTCCATTCATCATTCATCCATCGCCATGTCTCTCTCTTTCCATTCTCACTCACCATCCTCTCTCTCTACGTCGTCTCTTAGGATCGCAAGGAGCTTCCTAGGGACTGTTATGACAGATTTCTTTCAACCAAGAATTGGAAATTGGCACTTAACAAGAAGAGGTGGAAGATTGATATCATTTAAGGGCTGTGTGAAATTCGTACATACCACATGCCGAATCTCTATCCCCGGTACCTCGCCAGCAAATGATGTTAAACCCCCATCTAACAATAGCTTCAGGGATAAGAAAGCAGTTCCTGATGCAGACCCTCCCAGTATCAAAGATGTTAACCTTTTGTATCAATTTTTTGACCAAAGTACCAAGCTCATGGTGTTGACTGGAGCTGGAATTAGCACAGAGTGTGGGATCCCTGACTATCGAAGCCCCAATGGAGCTTATAGTACCGGTTTCCGACCAATAACTCATCAGGAGTTTCTCCGTTCAAGTCGAGCCCGGAGGCGATATTGGGCAAGGAGCTATGCTGGGTGGAGGCGATTTACAGCAGCACAACCTAGTGCTGCCCATCGTGCTTTGGCAACATTGGAGAAGGCTGGCCGCATTGATTTTATGATTACCCAAAATGTTGATAGGCTTCATCATCGCGCCGGTAGCAATCCGTTAGAGTTGCATGGGACTGTATACACTGTAATTTGTATAGATTGTGGGCATTCCTTTTCCCGAAGCTTGTTTCAGGATCAATTGAAGGAGTTTAATCCAAAGTGGGCAGAAGCAATTGAAAATTTGGACCACGGAGACCCTGGGTCAGACAAGAGCTTTGGCATGAAACAAAGACCTGATGGTGATATTGAGATTGATGAAAAGTTTTGGGAGGAAGATTTTGTCCTTCCAACCTGTCAGAAGTGTAACGGAGTCCTCAAACCTGAGGTTGTCTTCTTTGGTGATAATGTTCCCAAGGACAGAGCTGATATGGCAATGGAAGCATCTAAAAGATGTGATGCTTTGCTTGTGCTAGGATCCTCTCTGATGACCTTCTCTGCTTTTCGACTTGTCAGGGCAGCTCATGAAGCTGGTGCTGCCACTGCAATTGTAAATATCGGGGAGACACGTGCTGATGATTTTGTACCCTTGAAAATCAATGCACGCTTGGGTGAGATTCTTCCAAGAGTACTTGACACCGGATCCATAATAGTACCTGCTGTGCAGTTATAG 1233 0.4542 MLGTPFSFSIHHSSIAMSLSFHSHSPSSLSTSSLRIARSFLGTVMTDFFQPRIGNWHLTRRGGRLISFKGCVKFVHTTCRISIPGTSPANDVKPPSNNSFRDKKAVPDADPPSIKDVNLLYQFFDQSTKLMVLTGAGISTECGIPDYRSPNGAYSTGFRPITHQEFLRSSRARRRYWARSYAGWRRFTAAQPSAAHRALATLEKAGRIDFMITQNVDRLHHRAGSNPLELHGTVYTVICIDCGHSFSRSLFQDQLKEFNPKWAEAIENLDHGDPGSDKSFGMKQRPDGDIEIDEKFWEEDFVLPTCQKCNGVLKPEVVFFGDNVPKDRADMAMEASKRCDALLVLGSSLMTFSAFRLVRAAHEAGAATAIVNIGETRADDFVPLKINARLGEILPRVLDTGSIIVPAVQL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03143 410 Hamap NAD-dependent protein deacetylase [cobB]. 111 397 IPR026587 GO:0034979|GO:0051287
Aip08g03143 410 MobiDBLite consensus disorder prediction 85 108 - -
Aip08g03143 410 Gene3D - 126 392 - -
Aip08g03143 410 CDD SIRT4 120 394 - -
Aip08g03143 410 ProSiteProfiles Sirtuin catalytic domain profile. 118 406 IPR026590 -
Aip08g03143 410 Gene3D SIR2/SIRT2 'Small Domain' 145 323 IPR026591 -
Aip08g03143 410 PANTHER NAD-DEPENDENT PROTEIN LIPOAMIDASE SIRTUIN-4 87 399 - -
Aip08g03143 410 Pfam Sir2 family 135 350 IPR003000 GO:0070403
Aip08g03143 410 SUPERFAMILY DHS-like NAD/FAD-binding domain 100 400 IPR029035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03143 Aip-Chr8 121653371 121658100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03143 K11414 - gmx:100815194 641.728