Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03140 ATGGGAAACATATTTGTGAAGAAACCAAAGGTCACAGATGTCGATCGAGCAATTCTCGCTCTCAAGACCCAAAGGCGTAAGCTTGCTCAATATCAACAAAAGCTTGATGCTGTTATTGAAGCAGAAAAGCAAGCAGCAAGAGACTTGATTCGTGAAAAGAAGAAGGATCGGGCCTTGTTGGCCTTGAAAAAGAAAAAGGCACAAGAAGAATTGTTGAAGCAAGTTGATGCCTGGGTTATAAATGTTGAGCAACAATTAGCAGATATTGAACTGGCAAGCAAGCAAAAGGCTGTATTTGAAAGCTTAAAGGCTGGTAATGATGCAATGAAAGCTATACAAAGTGAGATAAACATTGAAGATGTTCAGAAGCTTATGGATGATACTGCTGAAGCTAAAGCTTATCAAGATGAAATTAATGCAATATTAGGAGAAAAATTATCAGCAGAGGATGAGGAGGAGATTTTAGCAGAATTTGAGAACTTGGAAACCCAGCTTGCAGTCGAAGATCTTCCAGAAGTTCCTTCCTCAGTGCTTCAAGATGACAAACTGGACCTTCCTGATGTCCCAACCAAGGCACCGGCTGCTAGCGAAGCCGAAGTATCTTCAGAAAGAAAAGTTTTGGAGGAACCATTGGCAGCTTGA 642 0.4097 MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALLALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFESLKAGNDAMKAIQSEINIEDVQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFENLETQLAVEDLPEVPSSVLQDDKLDLPDVPTKAPAASEAEVSSERKVLEEPLAA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03140 213 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20 HOMOLOG 1 2 213 - -
Aip08g03140 213 Gene3D - 14 90 - -
Aip08g03140 213 Pfam Snf7 17 192 IPR005024 GO:0007034
Aip08g03140 213 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 213 IPR005024 GO:0007034
Aip08g03140 213 Gene3D - 116 167 - -
Aip08g03140 213 Coils Coil 50 70 - -
Aip08g03140 213 MobiDBLite consensus disorder prediction 178 213 - -
Aip08g03140 213 Coils Coil 14 48 - -
Aip08g03140 213 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03140 Aip-Chr8 121643423 121646714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03140 K12195 - gmx:100820408 322.783