Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03128 ATGAAGTTCAAGGTAGCGAATGCATCGGAATACCTGGTAATAACAGGTGCAGGGATCAAAGACGTGAAGCTTGCGAAGAAAGCATGGGTATTGCCATGGCAATCATGCACCACCTTGGACCTTTCTCCGGTAAACTACACGTTCGAGCTCCAAGCCATGAGCGCCGAGAAGCTCCCTTTCAAGCTTCCTTCGGTGTTCACAATTGGTCCACGTGTTGACGATCACGAGTGTCTCCTAAAGTACGCCAAGCTCCTCTCGTCCCATGATAAGCTCTCCAACGACGTTAATGATCTGGTCCAAGGAGTCATTGAGGGCGAGACGCGTGTTCTCGCAGCTTCTATGACTATGGATCAGATCTTCAGGGGAACCAAGGAGTTCAAGCAAGGTGTGTTCGAGAAGGTTCAGATGGAACTGAATCAGTTTGGGCTGCTGATCTACAATGCCAATGTGAAGCAACTGGTGGACGTGCCGGGACATGAGTACTTCTCTTACTTGGGCAAGAAGACTCAGATGGAGGCCGCAAATCAGGCCAAGGTGGATGTTGCTGAGGCCAAGAAGAAGGGTGAGGTTGGTGCCAAGCTCAGGGAAGGCGAGACGCTCCAGAATGCCGCCAAGATCGATGCTGAGACGAAGATCATTGCCACTCAGAAGAAAGGCGAGGGCGATAAGGAGGAGATCAAAGTGAGGACATCAGTGAAGGTGTTTGAGAATTCGAAGGAAGCAGAGGTGGCAGAGGCAAATGCAGAGCTGGCAAGGAAGAAGGCGGAGTGGTCGAAGGTGGCGAAGTTGGCAGAGATGGAGGCTACAAAGGCAGTGTCTTTGAGGGAGGCAGAGCTGCAGGGGGAGGTTGAGAGGATGAATGCTAAGGCCAGGACTGAGAAACTTAGAGCTGATTACCTTACCAAGGCAAGCGTTGAGTATGAGACCAAGGCACAAGAGGCCAACTGGGAACTATACAAGAAACAAAAAGAAGCAGAAGCAGTTCTTTTCAAGAAGGAGAAAGAAGCTGAAGCACAAAAGAAATTAGCAGAGGCAGAGTTTTTTGCTCGCCAACAAGCCACCGATGCGCAGCTATACGCGAAGAAGAAGGAGGCAGAGGGGCTTATGGCTTCAGGGAAAGCCCAAGGTGCATATCTAAAGACACTCCATGAAGCACTTGGAGGAAACTATGCAGCTCTGAGGGACTACTTGATGATAGAGGGTGGAATGTATCAAGAGATTGCTAAGATTAATGGCGACGCAGTACGTGGACTCAAGCCGAATATCAGCATTTGGACGAACGGCAATGGCAAAGGCAGTGACGGCGGTAGTGCTTTGAAGGAGGTTGCCGGTGTGTATAAGATGTTGCCACCTTTTTTTAAGACAGTTGAAGAACAAACTGGTATGCTGCCTCCAGCTTGGATGGGAATCTTGACTCAAAAGAATGCGGATCAAACTTTTCTAAAGTGA 1449 0.4955 MKFKVANASEYLVITGAGIKDVKLAKKAWVLPWQSCTTLDLSPVNYTFELQAMSAEKLPFKLPSVFTIGPRVDDHECLLKYAKLLSSHDKLSNDVNDLVQGVIEGETRVLAASMTMDQIFRGTKEFKQGVFEKVQMELNQFGLLIYNANVKQLVDVPGHEYFSYLGKKTQMEAANQAKVDVAEAKKKGEVGAKLREGETLQNAAKIDAETKIIATQKKGEGDKEEIKVRTSVKVFENSKEAEVAEANAELARKKAEWSKVAKLAEMEATKAVSLREAELQGEVERMNAKARTEKLRADYLTKASVEYETKAQEANWELYKKQKEAEAVLFKKEKEAEAQKKLAEAEFFARQQATDAQLYAKKKEAEGLMASGKAQGAYLKTLHEALGGNYAALRDYLMIEGGMYQEIAKINGDAVRGLKPNISIWTNGNGKGSDGGSALKEVAGVYKMLPPFFKTVEEQTGMLPPAWMGILTQKNADQTFLK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03128 482 Coils Coil 236 256 - -
Aip08g03128 482 PANTHER FLOTILLIN-RELATED 1 477 IPR027705 -
Aip08g03128 482 CDD SPFH_flotillin 29 176 - -
Aip08g03128 482 Gene3D Band 7 domain 38 156 IPR036013 -
Aip08g03128 482 PANTHER FLOTILLIN-LIKE PROTEIN 6 ISOFORM X1 1 477 - -
Aip08g03128 482 Pfam SPFH domain / Band 7 family 7 185 IPR001107 -
Aip08g03128 482 SUPERFAMILY Band 7/SPFH domain 32 173 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03128 Aip-Chr8 121417963 121439969 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03128 K07192 - mnt:21391890 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03128 08 121417963 121439969 Aip08g03128 08 121417963 121439969 ECH