Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03108 ATGTTAATAGGAAGCACACTTCCTCCGAGGCACTCCCTTCTCTCCCCTCCGCACCTCCTTCGTCCGACCAATCACAACCTGCCACGTCATCATCATCCTCCGCTTCCTCATCGGACAAACCCTCGCTTCATCCTCNNNNNNNCCGTAACCACCCGTGACGGAGGCGGCGGGGCCGCCGCACAGGAGACCGTCGTCGTCGATCGCCGTGGCGAGCACGCCGCAGTGTGCCGATGGACGGTGCAAAATTTCCCGCGAGTGAAGGCACGCGCCCTTTGGAGCAAGTACTTCGAGGTAGGAGGATACGATTGCCGGTTATTGGTGTACCCTAAGGGCGATTCGCAAGCTCTTCCAGGTTACATCTCAATCTATCTTCAAATCATGGACCCTCGCGGCACCTCTTCTTCCAAATGGGACTGTTTCGCCAGTTACCGTCTCGCAATCGTTAACCTCGCCGACGATTCCAAAACCATACACCGCGATTCTTGGCATCGATTCTCCAGCAAGAAGAAATCTCACGGTTGGTGCGATTTCACGCCTTCTTCAACCGTCTTCGATCCCAAACTAGGTTACCTAAACGCCGCCAACGACGGCGTTTTGATCACGGCCGACATACTCATCCTCAACGAGTCCGTTAACTTCACGCGCGATAACAACGAGGTCCAGTCTTCGTCCTCGTTGTCGTCCGGTTCGGCCGCAAGCTCTTCCGTCGTTGCTGGGCCGGTTTCGGATGTTCTGAGTGGAAAGTTCACTTGGAAGGTTCACAATTTTAGTTTGTTTAAGGAGATGATTAAGACGCAGAAGATAATGAGCCCTGTTTTCCCTGCTGGCGAGTGTAATTTGAGGATTAGTGTGTATCAGAGTTCGGTGAATGGTGTTGAGTATTTGTCAATGTGTTTGGAGAGTAAGGACACTGATAAGACTGTGATGTTGTCTGATAGGAGTTGCTGGTGTTTGTTTAGGATGTCTGTGTTGAACCAGAAGCCCGGTTTGAATCATATGCATAGGGATTCGTATGGGAGGTTCGCTGCGGATAATAAGAGTGGCGATAACACGAGTTTGGGGTGGAATGATTATATGAAAATGTCAGATTTCATAGGGACTGAGTCAGGGTTCTTGGTTGATGATACTGCAGTGTTTAGCACCTCGTTTCATGTGATTAAGGAGTTTAGTAGCTTCTCCAAGAATGGGGCTATGATTGCTGGAAGGAGCGTGGGTGGGGCGAGGAAGTCCGATGGCCATATCGGCAAGTTCACTTGGAGGATTGAAAATTTTACCAGATTGAAGGATTTGCTGAAGAAGAGGAAGATTACTGGCCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGTAACCGGGATTGTCGTCTTATTGTTTATCCCAGAGGGCAGTCCCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCTAGGAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGTTTGTCAGTTGTGAACCAGAGGATGGAGGAGAAGTCTGTCACCAAGGAATCTCAGAACCGCTACTCCAAAGCTGCAAAGGATTGGGGCTGGCGTGAATTTGTGACACTTACAAGTCTCTTTGATCAAGATTCTGGTTTTCTTGTCCAGGACACTGTTATATTCTCTGCTGAAGTTCTTATATTGAAAGAGACATCAATAATGCAAGATTTTACCGATAATGATTCTGAATTGAGCAATGGTGGTTCCCTTGTTGATAGTTTTGGGAAAAGAAGTTCGTTTACATGGAAAGTGGAGAATTTCCTGTCTTTTAAGGAAATCATGGAGACTCGGAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGGATCGGTGTCTACGAGTCCTTTGATACAATATGTATTTATTTAGAGAGTGACCAGGCTGTCGGTAGCGATCCTGATAAAAACTTCTGGGTCAGATACAGGATGGCTGTTGTGAATCAGAAAAATCCGGCCAAGACAGTGTGGAAAGAATCCTCTATCTGCACAAAGACGTGGAATAATTCCGTTTTACAATTCATGAAGGTCTCAGATATGCTAGAAGCAGATGCAGGGTTTCTTGTCCGTGACACCGTTGTTTTTGTATGCGAAATATTGGACTGCTGCCCTTGGTTTGATTTTGCTGATCTAGAGGTGTTGGCATCAGAGGATGATCAGGATGCATTGACAACTGATCCTGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGGAAGATATTTTCAGAAATCTTCTTTCCCGAGCTGGATTCCATCTGTCATATGGAGATAATCCTTCACAGCCACAGGTTACTTTACGAGAGAAACTTTTAATGGATGCTGGTGCAATTGCTGGGTTTCTGACTGGACTTCGGGTTTATCTTGATGATCCTGCTAAAGTAAAGCGCTTGCTTCTTCCTACCAAGCTCTCTGGTAACTGTGATGGGAATAAGACCAGCAAGGCTGATGAGTCTTCACCTAGTTTGATGAATTTGCTGATGGGAGTTAAAGTATTGCAGCAAGCAATCATTGATTTACTACTGGATATAATGGTTGAATGCTGCCAGCCTTCTGAAGGGGTTCCTGTTGCTGATTCTGTGGATGCATGCTCGAAACCTCCAGATGGCAGTGGAGCTGCTAGTCCTCTTGAGTGTGATAGAGAAAATGGAGCAATTGAGTCAATCCAAGTTCCCGTTTACGAGAGGTTGGATTCTGTTGTTGAAGAGAGTGGCGGTACATCTGCTGTGCAGAGCTCTGATTTAAATGGGAATGTTATTCAGGAAAAGGCTGTTCCTGGACAACCTATTTGTCCACCAGAAACATCTGCTGCTGGTTCAGATAATGCAACTTTACGGTCAAAGACAAAGTGGCCAGAACAGTCTGAGGAGCTCCTGGGATTGATTGTGAACTCACTTAGAGCTTTGGATGGAGCTGTTCCGCAAGGATGTCCAGAGCCAAGACGACGACCTCAGTCTGCACAGAAAATTGCTCTTGTATTGGACAAAGCTCCTAAGCATTTGCAAGCAGACCTTGTTGCACTGGTGCCAAAATTGGTTGAGCTGTCAGAACACCCACTGGCTGCCTGTGCACTTCTTGAGCGACTACAAAAGCCAGATGCAGAACCTTCTTTACGAATACCTGTGTTTGAAGCTCTTAATCAACTGGAGTGTGGTAGTGAAGTGTGGGAACGCATTCTGTTTCAGTCGTTTGAACTTTTGACAGATTCAAATGATGAACCCCTTGCTGCGACGATAGATTTTATATTCAAAGCAGCATCTCAATGTCAACACTTACCTGAAGCAGTTAGGTCTGTTCGTGTAAGGCTGAAAAATCTTGGTCTTGATGTGTCGCCTTGTGTCCTTGACTTCTTGAGCAAGACTATAAATAGTTGGGGTGATGTTGCTGAAACCATACTTAGGGACATTGATTGTGATGATGATTATGGTGATAGTTGCTCAGCTCTGCCTTGTGGAATTTTTTTATTTGGTGAACACAGCACCACTACTGCCGGACTTCATGTGATTGATGAGCAGGCTTTTCGTGCTAGTCGTCATTTTTCTGATATATACATACTGTTTGAGATGTTATCCATTCCTTGTCTTGCTGTTGAAGCCTCTCAAACATTTGAGAAAGCTGTAGCTCGAGGTGTAATAGGGGCTCAGTCTGTAGCCTTAGTATTGGAAAGCCGCCTTTCTCAAAGATTGAGTAATGGTGCCAGATATGTTTCTGAAAATTTTCAGCATCCAGAGGGTGCATCAGAGGGAGATGTAAGTGAGCAACTTGGAGTTCAAAGGGAGGATTTTACTTCAGTTCTTGGTCTTGCTGAAACTTTGGCCCTTTCGAAAGACCAATGTGTGAGGGAATTTGTGAAGTTGCTTTACACGATATTGTTTAGATGGTATGCCAATGAATCTTACCGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCCACTAGCACAGCAGATGCCGGTCGTGAAGTAGATTTTGATTTGGATGTCTTAGTTACTTTAGTCTGTGAGGAGCAGGAGATTATTCGACCTGTTTTGAGTATGATCCGTGAAGTTGCTGAACTTGCAAATGTTGACCGGGCTGCTCTGTGGCACCAGTTATGCGCTAGTGAAGATGAAATTATTCGTGTTCGTGAAGAAAGCAAAATTGAGATTTCTAATATGGCTAAGGAAAAAGCTATTATAGCACAAAAACTGAGTGAATCCGAGGCCACAAGCAATCGCCTCAAGTCTGAAATGAGGACTGAGATGGATCGGTTTTCTCGAGAAAAGAAGGAAATATTAGAACAGGTTCAAGAAGTTGAGAGTCAGCTTGAGTGGCTTCGTTCGGAGCGGGATGAAGAAATAACAAAGCTTTCTGCGGAGAAGAAAGTTCTTCAGGACCGTTTACACGATGCAGAGACACAAATTTCTCAGTTGAAATCTCGAAAACGTGATGAATTGAAGAAAGTAGTAAAAGAGAAAAATGCACTGGCTGAAAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAACTGAAAAGATTTGCAACAGAGAATGTAACACGGGAAGAAATCCGGCAATCACTTGAGGATGAAGTCCGTAGACTGACTCAAACAGTAGGGCAAACCGAGGGAGAAAAGCGGGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCTAAGTTGCAAGCCTGCCAGCAATATATTCACACGCTAGAGGCCTCCCTCCAGGAGGAAATGTCGCGACATGCCCCTCTGTATGGTGCCGGTCTGGAAGCTCTATCAATGAAAGAGTTGGAAACACTATCACGTATTCATGAAGATGGGCTGAGGCAGATCCACGCCCTTCAACAGCGTAAAGGGAGTCCTGCCGGGAGTCCACTTATGAGCCCCCATGGCCATGGTCTCCCCCACAGCCACGGATTATATCCTGCTGCATCTCTGCCGATGGCCGTTGGGATGCCCCCACAAATCATCCCAAATGGGGTAGGGATCCATAGCAATGGCCATGTGAATGGTGCAGTTGGACCTTGGTTTAATCACACTTGA 5085 0.4572 MLIGSTLPPRHSLLSPPHLLRPTNHNLPRHHHPPLPHRTNPRFILXXXVTTRDGGGGAAAQETVVVDRRGEHAAVCRWTVQNFPRVKARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLNAANDGVLITADILILNESVNFTRDNNEVQSSSSLSSGSAASSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDRSCWCLFRMSVLNQKPGLNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGTESGFLVDDTAVFSTSFHVIKEFSSFSKNGAMIAGRSVGGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTDNDSELSNGGSLVDSFGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFDFADLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLSYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGNCDGNKTSKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGVPVADSVDACSKPPDGSGAASPLECDRENGAIESIQVPVYERLDSVVEESGGTSAVQSSDLNGNVIQEKAVPGQPICPPETSAAGSDNATLRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVELSEHPLAACALLERLQKPDAEPSLRIPVFEALNQLECGSEVWERILFQSFELLTDSNDEPLAATIDFIFKAASQCQHLPEAVRSVRVRLKNLGLDVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDSCSALPCGIFLFGEHSTTTAGLHVIDEQAFRASRHFSDIYILFEMLSIPCLAVEASQTFEKAVARGVIGAQSVALVLESRLSQRLSNGARYVSENFQHPEGASEGDVSEQLGVQREDFTSVLGLAETLALSKDQCVREFVKLLYTILFRWYANESYRGRMLKRLVDRATSTADAGREVDFDLDVLVTLVCEEQEIIRPVLSMIREVAELANVDRAALWHQLCASEDEIIRVREESKIEISNMAKEKAIIAQKLSESEATSNRLKSEMRTEMDRFSREKKEILEQVQEVESQLEWLRSERDEEITKLSAEKKVLQDRLHDAETQISQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEDGLRQIHALQQRKGSPAGSPLMSPHGHGLPHSHGLYPAASLPMAVGMPPQIIPNGVGIHSNGHVNGAVGPWFNHT 1694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03108 1694 SUPERFAMILY TRAF domain-like 75 212 - -
Aip08g03108 1694 Coils Coil 1419 1524 - -
Aip08g03108 1694 Coils Coil 1532 1559 - -
Aip08g03108 1694 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 407 559 IPR008974 GO:0005515
Aip08g03108 1694 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 576 708 IPR008974 GO:0005515
Aip08g03108 1694 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 242 389 IPR008974 GO:0005515
Aip08g03108 1694 ProSiteProfiles MATH/TRAF domain profile. 73 204 IPR002083 GO:0005515
Aip08g03108 1694 MobiDBLite consensus disorder prediction 936 956 - -
Aip08g03108 1694 SMART math_3 75 183 IPR002083 GO:0005515
Aip08g03108 1694 SMART math_3 587 687 IPR002083 GO:0005515
Aip08g03108 1694 SMART math_3 419 531 IPR002083 GO:0005515
Aip08g03108 1694 SMART math_3 251 364 IPR002083 GO:0005515
Aip08g03108 1694 SUPERFAMILY TRAF domain-like 583 707 - -
Aip08g03108 1694 MobiDBLite consensus disorder prediction 1624 1653 - -
Aip08g03108 1694 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 70 221 IPR008974 GO:0005515
Aip08g03108 1694 CDD MATH 415 550 IPR002083 GO:0005515
Aip08g03108 1694 CDD MATH 247 379 IPR002083 GO:0005515
Aip08g03108 1694 SUPERFAMILY TRAF domain-like 244 389 - -
Aip08g03108 1694 SUPERFAMILY TRAF domain-like 415 556 - -
Aip08g03108 1694 PANTHER TRAF-LIKE FAMILY PROTEIN 59 1694 - -
Aip08g03108 1694 Gene3D - 1449 1642 - -
Aip08g03108 1694 ProSiteProfiles MATH/TRAF domain profile. 582 706 IPR002083 GO:0005515
Aip08g03108 1694 CDD MATH 584 706 IPR002083 GO:0005515
Aip08g03108 1694 CDD MATH 77 204 IPR002083 GO:0005515
Aip08g03108 1694 ProSiteProfiles MATH/TRAF domain profile. 414 550 IPR002083 GO:0005515
Aip08g03108 1694 PANTHER TRAF-LIKE FAMILY PROTEIN 59 1694 - -
Aip08g03108 1694 ProSiteProfiles MATH/TRAF domain profile. 246 383 IPR002083 GO:0005515
Aip08g03108 1694 MobiDBLite consensus disorder prediction 13 41 - -
Aip08g03108 1694 Pfam MATH domain 595 702 IPR002083 GO:0005515
Aip08g03108 1694 Pfam MATH domain 82 204 IPR002083 GO:0005515
Aip08g03108 1694 Pfam MATH domain 446 552 IPR002083 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03108 - - gmx:100788511 2938.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03108 08 121112114 121121950 Aip08g03108 08 121112114 121121950 ECH