Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03065 ATGGCTCCAGCTCTGTGCCTATCACTTCTAACTTCCCTTACAATTACACCAACGCCAGGTATTTATATTAAGAACCATGCAAATTCAAAGCACAACAGAGTCAACTCTGTGTTTCAACGTTCTTCCACTTCTAAACTCATTGCAAAGGCTAATGCAAAAGGAAACCAGCAAAACACCAAACCCAATAGTATGATATGTGCAGATTGTGATGGAAATGGAGCAGTTCAATGCTCTCAGTGCAAAGGTAGTGGGGTGAACTCTGTTGATGTTTTCAATGGACAGTTTAAAGCTGGTGACTCATGCTGGCTTTGCGGGGGAAGGAAGGAAATGTTATGTGGAAATTGCAATGGAGCTGGATTTGTGGGTGGCTTCTTGAGCACTCATGATCAGTAG 393 0.4275 MAPALCLSLLTSLTITPTPGIYIKNHANSKHNRVNSVFQRSSTSKLIAKANAKGNQQNTKPNSMICADCDGNGAVQCSQCKGSGVNSVDVFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTHDQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03065 130 PANTHER PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC 1 124 - -
Aip08g03065 130 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 1 124 - -
Aip08g03065 130 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 60 121 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03065 Aip-Chr8 120379943 120381783 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03065 - - adu:107463185 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03065 08 120379943 120381783 Aip08g03065 08 120379943 120381783 ECH