Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03059 ATGAGGTATTTTCACCTTGCACTTTTGTCTACACTATTGTTCATAAAATTAAGCCTAATTCTTGGAGATGTTGGCACTGCTACTTCTTATGGACCTCCATATATACCCACTAGTTGTGATGGAAATAGAAGAGAGCAATTTCCAGCGGGGAATATGTTTGTAGCTGTGAATGAAGGATTGTGGGACAATGGTGCTGCATGTGGAAGGCGTTACAAAATAAGGTGTCTGAGTGGAGACAATAGACCCTGCAAAAGTGACATAATTGAAGTTAAGGTTGTTGATTTGTGTCATCGAACTCCGTGTCCCACCATGCTTTTGTCAACTACTGCCTTCTCAGCCATCTCTCGCTTCTCCAATGCCAAAATCAACATTGAATATGCCCAGATTTGA 390 0.4128 MRYFHLALLSTLLFIKLSLILGDVGTATSYGPPYIPTSCDGNRREQFPAGNMFVAVNEGLWDNGAACGRRYKIRCLSGDNRPCKSDIIEVKVVDLCHRTPCPTMLLSTTAFSAISRFSNAKINIEYAQI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03059 129 Pfam Lytic transglycolase 55 126 IPR009009 -
Aip08g03059 129 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 128 - -
Aip08g03059 129 SUPERFAMILY Barwin-like endoglucanases 12 128 IPR036908 -
Aip08g03059 129 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 129 IPR007112 -
Aip08g03059 129 Gene3D - 23 129 IPR036908 -
Aip08g03059 129 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03059 Aip-Chr8 120287010 120287568 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03059 - - gmx:100792215 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03059 08 120287010 120287568 Aip08g03059 08 120287010 120287568 ECH