Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03047 ATGGAAGCAATGCAGAATAATCCTCAACAACACACACGGAGGCATGAAGATGATGAGAATGTGATCTGGGTGGAGGAGAAAGACTTCTCAAAGGCACCCGACAATCGCACATTAGCATTTCAAACTGTTCAACATTCACTCTCCAAAACTAGAGAAAAAATGAGTAGGCCAGGAGATTGGAACTGCAGGACATGCAACCACCTCAACTTCCAAAGAAGGGAATCATGCCAACGGTGCGGCGAGCCCAGGGGCGTCGGCGCCGGTGCCGGTGGAGACTATGGTGGAGCCTTTGGTGACTGGTACTGCACCGTTGGCAATTGTGGAGCCCACAACTTCGCAAGCCGGTCTAGCTGCTTCAAGTGTGGTGCTCCCAAGGAGGACTCCTCCGCCGCCGGATTTGACGCCGACATTCCTCGAACTAGAGGCTATAGCTTTGCCGGCACCACTGCTGCTCGCCCTGCTTGGAAATCCGGCGACTGGATATGTACCAGGTCTGGATGCAATGAGCATAACTTTGCAAATAGAATGGAATGCTATCGATGCAATGCACCAAGGGACTCTTCTAGTTCTAGGCCTCCCTATTCATCCTAG 591 0.5195 MEAMQNNPQQHTRRHEDDENVIWVEEKDFSKAPDNRTLAFQTVQHSLSKTREKMSRPGDWNCRTCNHLNFQRRESCQRCGEPRGVGAGAGGDYGGAFGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAAGFDADIPRTRGYSFAGTTAARPAWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSSRPPYSS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03047 196 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g03047 196 ProSitePatterns Zinc finger RanBP2-type signature. 160 181 IPR001876 -
Aip08g03047 196 ProSiteProfiles Zinc finger RanBP2 type profile. 56 85 IPR001876 -
Aip08g03047 196 SUPERFAMILY Ran binding protein zinc finger-like 52 84 IPR036443 -
Aip08g03047 196 ProSiteProfiles Zinc finger RanBP2 type profile. 156 187 IPR001876 -
Aip08g03047 196 ProSitePatterns Zinc finger RanBP2-type signature. 60 79 IPR001876 -
Aip08g03047 196 PANTHER ZINC FINGER PROTEIN 35 188 - -
Aip08g03047 196 PANTHER OS02G0203700 PROTEIN 35 188 - -
Aip08g03047 196 ProSiteProfiles Zinc finger RanBP2 type profile. 96 127 IPR001876 -
Aip08g03047 196 Gene3D - 48 85 - -
Aip08g03047 196 Gene3D - 150 188 - -
Aip08g03047 196 Gene3D - 96 128 - -
Aip08g03047 196 SMART zf_4 158 184 IPR001876 -
Aip08g03047 196 SMART zf_4 58 82 IPR001876 -
Aip08g03047 196 SMART zf_4 98 124 IPR001876 -
Aip08g03047 196 SUPERFAMILY Ran binding protein zinc finger-like 151 188 IPR036443 -
Aip08g03047 196 Pfam Zn-finger in Ran binding protein and others 56 83 IPR001876 -
Aip08g03047 196 Pfam Zn-finger in Ran binding protein and others 156 185 IPR001876 -
Aip08g03047 196 Pfam Zn-finger in Ran binding protein and others 98 127 IPR001876 -
Aip08g03047 196 SUPERFAMILY Ran binding protein zinc finger-like 94 128 IPR036443 -
Aip08g03047 196 ProSitePatterns Zinc finger RanBP2-type signature. 100 121 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03047 Aip-Chr8 119912302 119918416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03047 - - gmx:100811107 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03047 08 119912302 119918416 Aip08g03047 08 119912302 119918416 ECH