Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03036 ATGAGAAGACACTCCTTTTTGTTGGCTCTGTTGTGTGTCCTATGTCACGTAGCATTCTCCTTTAACGACGGACAAGTGGCAAATGGAAATTTCGAGCAAGGTCCGAAAGCTTCGGACATGAAAGGCACGGTGGTGACGAAGCGCGACGCCATACCGGAGTGGGAGATCTCCGGCTTAGTTGAGTACATAAAATCAGGTCAAAAACAAGGTGACATGTTGCTAGTAGTGCCAGAGGGTGCACATGCAGTGAGGCTTGGCAATGGTGCTTCAATCAAACAGAGAATCAAGGTCATAAAAGGAAATTACTATTCCATAACATTTGTGGTGGCTCGCACGTGTGCACAAAATGAGAGACTCAATGTTTCTGTGGCACCAGATTGGGTTGTGTTACCTATGCAAACGTTGTATAGTAGTGACGGTTGGGATGCTTATGCTTGGTCTTTTCAAGCAGATTACTCTCTTGCTGAGTTGGTTATTCATAATCCAAGATCAAAGGAAGAGGATCAAGCTTGTGGACCACTCATTGATTCCGTTGCTATCAAAGCTCTCTACCCTCCTAGGCCAACTAAAATTAACATATTAAAGAACGGTGGATTTGAAGAAGGACCATACATATTTCCAAACACATCATGGGGTGTTCTAATTCCACCAAACATTGTAGACCTAAGTGACCACTCTCCCATACCAGCGTGGATTGTAGAGTCCTTAAAAGCAGTGAAGTACATAGATTCTCAACACTTCTCTGTCCCACAAGGAAACAGAGCAGTGGAGCTTGTAGCTGGAAAAGAAAGTGCCATTGCACAAGTTGTAAGAACAGTTGTTGGCAGAACCTATGTCCTTACTTTTGATGTTGGAGATGCTGGTGATTCATGTGAAGGCCCAATGGTTGTTGAAGTCTATGCAGCAAAAGAGAACACAAAAGTGTCTTATGAATCAAAGGGTAAAGGTGGCTTCAAACTTGGGTTTCTCAAGTTTAAGGCTATTAGCACAAGAACTAGAATTGTGTTCCTCAGCTCCTTCTATACCATGAAGAGTGATTCATCTTTATGTGGCCCGGTTATTGATGATGTCAGGTTGATTAGCGTTCATAAATCTTAA 1098 0.429 MRRHSFLLALLCVLCHVAFSFNDGQVANGNFEQGPKASDMKGTVVTKRDAIPEWEISGLVEYIKSGQKQGDMLLVVPEGAHAVRLGNGASIKQRIKVIKGNYYSITFVVARTCAQNERLNVSVAPDWVVLPMQTLYSSDGWDAYAWSFQADYSLAELVIHNPRSKEEDQACGPLIDSVAIKALYPPRPTKINILKNGGFEEGPYIFPNTSWGVLIPPNIVDLSDHSPIPAWIVESLKAVKYIDSQHFSVPQGNRAVELVAGKESAIAQVVRTVVGRTYVLTFDVGDAGDSCEGPMVVEVYAAKENTKVSYESKGKGGFKLGFLKFKAISTRTRIVFLSSFYTMKSDSSLCGPVIDDVRLISVHKS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03036 365 PANTHER OS02G0527500 PROTEIN-RELATED 6 364 - -
Aip08g03036 365 Gene3D - 188 361 - -
Aip08g03036 365 PANTHER PLANT/F18G18-200 PROTEIN 6 364 - -
Aip08g03036 365 SUPERFAMILY Galactose-binding domain-like 21 181 IPR008979 -
Aip08g03036 365 Pfam Protein of unknown function (DUF642) 25 181 IPR006946 -
Aip08g03036 365 Pfam Protein of unknown function (DUF642) 193 358 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03036 Aip-Chr8 119603986 119608344 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03036 - - gmx:100801917 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03036 08 119603986 119608344 Aip08g03036 08 119603986 119608344 ECH
Aip06g03317 06 129740454 129745886 Aip08g03036 08 119603986 119608344 ECH