Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03029 ATGCCTATGCACAAGCACAAGGTTTCTGTTCATCTTCTATCCTTCCAGGCCCTCGTTTTTTTCTTATCAATTTTCATTCACTTCTCTCATTGTGATGTTGGCACTGCTTCTCACTACGGTCCTCCCTTTTTACCCACAGCATGTTACGGTAAAGACGCATCAGAGTTTCCATCGAGCAACATGTTTGCATCAGCAGGAGAAGGCATATGGGACAATGGTGCTGCATGTGGTAGGCAGTATCAGGTGAGGTGCATCAGTGCAGCCGCACCTAGAACCTGCATTCCTGGCCAGTTGATCCAGATCAAGATCGTCGATCGCGCGCAATCAACGGTCTCTAGGCCTTCCAGGGCTGGAACTTCCATGGTCCTCTCCACCACTGCATTCCAGGCCATTGCAAATGCCTCTGCTTCTTTGATCAACATTGAATTTCAACAGGTTTAA 441 0.4807 MPMHKHKVSVHLLSFQALVFFLSIFIHFSHCDVGTASHYGPPFLPTACYGKDASEFPSSNMFASAGEGIWDNGAACGRQYQVRCISAAAPRTCIPGQLIQIKIVDRAQSTVSRPSRAGTSMVLSTTAFQAIANASASLINIEFQQV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03029 146 Pfam Lytic transglycolase 69 142 IPR009009 -
Aip08g03029 146 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 34 146 IPR007112 -
Aip08g03029 146 SUPERFAMILY Barwin-like endoglucanases 19 146 IPR036908 -
Aip08g03029 146 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 146 - -
Aip08g03029 146 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 146 - -
Aip08g03029 146 Gene3D - 30 146 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03029 Aip-Chr8 119457367 119463469 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03029 - - gmx:100803494 217.624