Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03010 ATGTCTAATACTAACACTTCAGTACTTGATTGCTTCAAACCTGATGCAAAATTCAACACGCGTGATCGGAACACTGCAAATTATCATCCTAGTATTTGGAAGGATCATTTCCTTCAATATGCTTCACAATCCATGGAATTTGATGATGAAACGAAGGCACAAATTGAAAAACTGAAGAAAGAAGTAGTCAAAATGCTTATTGATATCTCTAAACCCATTGAAGAAATAGTTAACTTGATTGATTTAATATGTCATTTGGGGATTCATTATCACTTTGAAAGCGAGATTGATGAAGTGCTGCAACAAATTCACAAGAATTATACCCAAAATGGAGAAATAATAATTGTTGATGATAACCTTCGCTTACTTGCTTTGCTTTTTAGGTTATTAAGGCAACAAGGATATCACGTTTCACCAAATGTGTTCAACAAATACAAGGATGAGAATGGAAATTTCAGTGAAAAACTTGTGAAGGATGTGGAGGGATTGGTAGAGTTGTATGAAGCATGTCATCTCAGAATTCATGGAGAAGAAATATTAGATGAAGCTTATGCATTCGCTTCCACTAAACTTAAATCCATTGCGACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAATTATAGTTTAAAGCAATCTTTACACCGAGGTTTGCCGAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCAAATTCTACTCACTCTTGCAAAATTAGACTTTAATTTCCTACAAAACTTGCATCGAAAAGAAGTTGGCAACATTTGCAAGTGGTGGAAGAAGCTTGACGTTGCTGCAAATTTTCCATATGCTCGAGATAGAATTGTGGAATGTTGTAATTGGGTTCTAGCGGTTTATTTTGAGCCCCAATATTCTCAAGCTAGAAAAATATTGACAAAATTATTGGCTCTTACATCAATTATTGATGATACATACGATGCTTATGGAACTATAGATGAACTAAAACTTTTCACTGAGGCAATTGAAAGGTGGGATATTGGCTGTTTGAATAATCTTCCAAAATACATGAAATTAATTTATGTGTCTCTCCTCAAGATTTTTGAAGAAGCCGAACGAGAACTTGAGAAGCAAGGAAGAGTACATTGCATTAAATATGCCATAAAAGAATTTCAGGAGGCAACTCAGGCCTATATGACTGAGACTAAATGGTTGAATAACACGTATATACCAACAATAACAGAGTACATACAGATATCAACATTAACATCTGGTTATCCATTCCACATGACAAGTTCTTACATTGGCATAGGAGATATTGCTATAGAAGACATCTTCAAATGGGTAACAAGTAAACCTAAAATTGTTATAGCTTCCACAATTGTTTGCAGGTTCATGGATGACATAGTCTCTAGTGAGTTTGAACAAGAAAGAGAACATATTGTCCCACTCTTAGAATGCTATATGAGAGAATATGATATATCTAAAGAAGAAGCCATTCAAGAATTACAAAAGGGAGTTACAGAGGCTTGGAAGAATATAAATGAGGAATGCCTCAAGCCAATCAAAGTTCCAGTGATGGTTCTAATGCGTATTGTCAACATGGCACGATTTATTGATGTGATGTACAAAGATGAAGATTGCTACACTCATGCTAAAGAGAAAATGAAGGAATGCATCAAGCTTTGCTTGTCGATCCGGTGCCAATAA 1689 0.3541 MSNTNTSVLDCFKPDAKFNTRDRNTANYHPSIWKDHFLQYASQSMEFDDETKAQIEKLKKEVVKMLIDISKPIEEIVNLIDLICHLGIHYHFESEIDEVLQQIHKNYTQNGEIIIVDDNLRLLALLFRLLRQQGYHVSPNVFNKYKDENGNFSEKLVKDVEGLVELYEACHLRIHGEEILDEAYAFASTKLKSIATQLKPSLAAQVNYSLKQSLHRGLPRLEARRFISIYEEDPTHNQILLTLAKLDFNFLQNLHRKEVGNICKWWKKLDVAANFPYARDRIVECCNWVLAVYFEPQYSQARKILTKLLALTSIIDDTYDAYGTIDELKLFTEAIERWDIGCLNNLPKYMKLIYVSLLKIFEEAERELEKQGRVHCIKYAIKEFQEATQAYMTETKWLNNTYIPTITEYIQISTLTSGYPFHMTSSYIGIGDIAIEDIFKWVTSKPKIVIASTIVCRFMDDIVSSEFEQEREHIVPLLECYMREYDISKEEAIQELQKGVTEAWKNINEECLKPIKVPVMVLMRIVNMARFIDVMYKDEDCYTHAKEKMKECIKLCLSIRCQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03010 562 CDD Terpene_cyclase_plant_C1 23 557 IPR044814 GO:0010333|GO:0016102
Aip08g03010 562 Pfam Terpene synthase family, metal binding domain 241 505 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aip08g03010 562 Pfam Terpene synthase, N-terminal domain 32 210 IPR001906 GO:0010333|GO:0016829
Aip08g03010 562 SFLD Isoprenoid Synthase Type I 236 557 - -
Aip08g03010 562 Gene3D - 71 236 IPR036965 GO:0010333|GO:0016829
Aip08g03010 562 PANTHER TERPENE SYNTHASE 2-RELATED 21 542 - -
Aip08g03010 562 SUPERFAMILY Terpenoid synthases 236 556 IPR008949 -
Aip08g03010 562 PANTHER OS04G0344100 PROTEIN-RELATED 21 542 - -
Aip08g03010 562 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 235 IPR008930 -
Aip08g03010 562 SFLD Terpene Cyclase Like 1 C Terminal Domain 236 557 IPR034741 -
Aip08g03010 562 Gene3D Farnesyl Diphosphate Synthase 30 551 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03010 Aip-Chr8 119182577 119211121 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03010 K15803 - aip:107611637 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03010 08 119182577 119211121 Aip08g03010 08 119182577 119211121 ECH