Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03008 ATGTCTAATACTAACAGTTCAGTACTTGATTGCTTCAAACCTGATGCAAAATTCAACACGCGTGATCGGAACACTGCAAATTATCATCCTAGTATTTGGAAGGATCATTTCCTTCAATATGCTTCACAATCCATGGTATGTATCTCTCTGTATATCTTTTATATGGATATAATGCAGGAATTTGACCATGAAACGAAGGCACAAATTGAAAATCTGAAGAAAGAAGTTGTAAAAATGCTTATTGATGCCTCAAAGCCCATTGAAGAAATAGTTAACTTGATTGATTTAATATGTCATTTGGGGATTCAATATCACTTTGAAAGCGAGATTGATGAAGTGCTGCAACAAATTCACAAGAATTATACAAAAAATGGAGAAATAATAATTGTTGATGATAACCTTCGCTTACTTGCTTTGCTTTTTAGGTTATTAAGGCAACAAGGATATCACGTTTCACCAAATGTGTTCAACAAATACAAGGATGAGAATGAAAACTTTAGTGAAAAACTTGCGAAGGATGTGGAAGGATTGCTAGGGTTATATGAAGCATGTCATCTCAGAATTCATGGAGAAGAAATATTAGATGAAGCTTATGCATTCACTTCCACTCAACTTAAATCCATTGCAACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAAGTATAGTTTAGGTCAACCTTCCCACCAAGGTTTGACAAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCCCACTCTCCTCGTTCTTGCAAAATTAGATTTTAATTTCCTACAAACCTTGCATCGAAAAGAAGTTGGCAACATTTGCAAGTGGTGGAAGGAGCTTAATGTTGCTGTAAAACTACTATATGCTCGAGATAGAATTGTAGAATGTTGTAACTGGATTTTGGCGGTTTATTTTGAGCCTCAATATTCTCAAGCTAGGAAAATACTGATAAAATTAATTGCTCTTATATCAATTATTGATGATACATATGATGCCTATGGAACTATAGATGAATTAAAACTTTTCACGGAGGCAATTGAAAGGTGGGATATTGGCTGTTTGAATGATCTTCCAAAATACATGAAATTAATTTATGAGTCTCTCTTCAATATTTTTGAAGAAGCAGAAAGAGAACTTGAAAAGCAAGGAAGAACACATTGCATTAAATATGTCATAAAAGAATTTCAAAAGACAATCCAGGCCTACATGACTGAGGTCAAATGGTTGAATAACAAGTATATACCAACAATGACAGAATACATCAAAACATCATCAATAACATCCGGTTATCCAATGCTAATAACAGCTTCTTACATTGGCATGAAAGATATGGCCACAGAAGACATCTTCAAATGGGTAACAAGTAAACCCAAAATTGTTACAGCTTCCACAATTATTTTCAGGTTCATGGATGACATTGTCTCTAATGAGTTTGAACAGAAAAGAGAACATATTGTCTCATACTTAGAATGCTATATGAGAGAATGTGATATATCCAAAGAAGAAGCCATTCAAGAATTGCAAAAGGGAGTTACAAATGCTTGGAAGGATATAAATGAGGAATGCCTGAAGCCAACTAAAGTTCCAATGTTGTTTCTAATGCGTATTGTCAACATGGCAAGATTTATTGATGTGATGCACAAAGATGAAGATTGTTACACTCATGCTGAAGGAAAAATGAAGAAATGCATTCAAGCTTTGCTTGTTGATCCGGTGCCAATAATATGA 1737 0.346 MSNTNSSVLDCFKPDAKFNTRDRNTANYHPSIWKDHFLQYASQSMVCISLYIFYMDIMQEFDHETKAQIENLKKEVVKMLIDASKPIEEIVNLIDLICHLGIQYHFESEIDEVLQQIHKNYTKNGEIIIVDDNLRLLALLFRLLRQQGYHVSPNVFNKYKDENENFSEKLAKDVEGLLGLYEACHLRIHGEEILDEAYAFTSTQLKSIATQLKPSLAAQVKYSLGQPSHQGLTRLEARRFISIYEEDPTHNPTLLVLAKLDFNFLQTLHRKEVGNICKWWKELNVAVKLLYARDRIVECCNWILAVYFEPQYSQARKILIKLIALISIIDDTYDAYGTIDELKLFTEAIERWDIGCLNDLPKYMKLIYESLFNIFEEAERELEKQGRTHCIKYVIKEFQKTIQAYMTEVKWLNNKYIPTMTEYIKTSSITSGYPMLITASYIGMKDMATEDIFKWVTSKPKIVTASTIIFRFMDDIVSNEFEQKREHIVSYLECYMRECDISKEEAIQELQKGVTNAWKDINEECLKPTKVPMLFLMRIVNMARFIDVMHKDEDCYTHAEGKMKKCIQALLVDPVPII 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03008 578 Coils Coil 395 415 - -
Aip08g03008 578 PANTHER OS04G0344100 PROTEIN-RELATED 20 558 - -
Aip08g03008 578 CDD Terpene_cyclase_plant_C1 23 574 IPR044814 GO:0010333|GO:0016102
Aip08g03008 578 SFLD Terpene Cyclase Like 1 C Terminal Domain 250 576 IPR034741 -
Aip08g03008 578 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 249 IPR008930 -
Aip08g03008 578 SUPERFAMILY Terpenoid synthases 250 575 IPR008949 -
Aip08g03008 578 Gene3D Farnesyl Diphosphate Synthase 59 565 IPR008949 -
Aip08g03008 578 Gene3D - 85 250 IPR036965 GO:0010333|GO:0016829
Aip08g03008 578 SFLD Isoprenoid Synthase Type I 250 576 - -
Aip08g03008 578 PANTHER TERPENE SYNTHASE 2-RELATED 20 558 - -
Aip08g03008 578 Pfam Terpene synthase family, metal binding domain 255 520 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aip08g03008 578 Pfam Terpene synthase, N-terminal domain 33 224 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03008 Aip-Chr8 119132925 119167461 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03008 K15803 - aip:107611637 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03008 08 119132925 119167461 Aip08g03008 08 119132925 119167461 ECH