LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g03002	ATGTGTAGTACTAACACTTCAGTACTTGATTGCTTCAACCCTGATGCAAAATTCAACATGCGTCATCGAAACACTGCAAATTATCATCCTAGTATTTGGAAGGATTATTTCCTTCAATATGCTTCACAATCCATGGAATTTGATGATGAAACGAAGGCACAAATTGAAAAACTGAAGAAAGAAGTTGTCAAAATGCTTATTGACGCCTCAAAGGCTATTGAAGAAATAGTTGACTTGATTGATTTAATATGTCATTTGGGGATTCATTATCACTTTGAAAGCGAGATTGATGAAGTGCTGCAACAAATTCACAAGAATTATACGAAAAATGGAGAAATAATAATTGTTGATGATAACCTCCATTTACTTGCTTTGCTTTTTAGGTTATTAAGGCAACAAGGATATCACGTTTCACCAAATGTGTTCAACAAATACAAGGATGAGAATGGAAATTTCAGTGAAAAACTTGTGAAGGATGTAGAGGGATTGGTAGAGTTGTATGAAGCATGTCATCTGAGAATTCATGGAGAAGAGATATTAGATGAAGCTTATGCATTCACTTCCACTCAACTTAAATCCATTGCGACCCAATTGAAGCCTTCACTTGCAGCACAAGTCAATTATAGTTTGAAGCAATCTTTACACCGAGGTTTGCCGAGATTGGAGGCACGCCGTTTTATTTCAATATATGAAGAAGATCCAACCCATAATCACACTCTACTCACTCTTGCAAAATTAGATTTTAATTTCCTACAAAACTTGCATCGGAAAGAATTTGGCAACATTTGCAAGTGGTGGAAGAAGCTTGATGTTGCTGCAAATTTTCCATATGCTCGAGATAGAATTGTGGAATGTTGTAACTGGGTTCTAGCGGTTTATTTTGAGCCCCAATATTTTCAAGCTAGAAAAATATTGACAAAACTGGTGGCTGTTACGTCAATTATTGATGATACATACGATGCTTATGGAACTATAGATGAATTGAAACTTTTCACTGAGGCAATTGAAAGGTGGGATATTGGCTGTTTGAATGAACTTCCAGAATACATGAAATTAATTTATGACTCTCTCTTCAATATTTTTGAAGAAGCAGAAAGAGAACTTGAAAAGCAAGGAAGAACACATTGCATTAAATATGTCATAAAAGAATTTCAAAAGACAATCCAGGCCTACATGACTGAGGTCAAATGGTTGAATAACAAGTATATACCAACAATGGCAGAGTACATCCAAACATCAGCAATATCATCTGGTTATCCGTTGCTCATAGCAATTTCCTATGTTGGCATGGGAGATATAGCCACAAAAGACATCTTTAAATGGGTAACAAATAAACCCAAAATTGTTACAGCTTCTGCAAATATGTGCAGGATCATGGATGACATTGTCTCTAATGAGTTTGAACAGAAAAGAGAACATATTGCCTCAATAATAGAATGCTACATGAGAGATTGTGGTGTATCTAAAGAAGAAGCCATTCAAGAATTGCAAAAGAGAGTTACAGATGCTTGGAAGGATATAAATGAGGAATTCCTGAAGCCAACAGAAGTTCCAAGGCTGTTTCTAATGAATATTCTCAACATGTCACGATTTATGGATGTGATGTACAAAGATGAAGATTGCTACACTCATGCTGAAGGAAAAATGAAGAAATGCATTCAAGCTTTGTTTGTTGATCCAGTGCCAATAATATGA	1695	0.3552	MCSTNTSVLDCFNPDAKFNMRHRNTANYHPSIWKDYFLQYASQSMEFDDETKAQIEKLKKEVVKMLIDASKAIEEIVDLIDLICHLGIHYHFESEIDEVLQQIHKNYTKNGEIIIVDDNLHLLALLFRLLRQQGYHVSPNVFNKYKDENGNFSEKLVKDVEGLVELYEACHLRIHGEEILDEAYAFTSTQLKSIATQLKPSLAAQVNYSLKQSLHRGLPRLEARRFISIYEEDPTHNHTLLTLAKLDFNFLQNLHRKEFGNICKWWKKLDVAANFPYARDRIVECCNWVLAVYFEPQYFQARKILTKLVAVTSIIDDTYDAYGTIDELKLFTEAIERWDIGCLNELPEYMKLIYDSLFNIFEEAERELEKQGRTHCIKYVIKEFQKTIQAYMTEVKWLNNKYIPTMAEYIQTSAISSGYPLLIAISYVGMGDIATKDIFKWVTNKPKIVTASANMCRIMDDIVSNEFEQKREHIASIIECYMRDCGVSKEEAIQELQKRVTDAWKDINEEFLKPTEVPRLFLMNILNMSRFMDVMYKDEDCYTHAEGKMKKCIQALFVDPVPII	564

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g03002	564	Pfam	Terpene synthase family, metal binding domain	241	506	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Aip08g03002	564	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	29	235	IPR008930	-
	Aip08g03002	564	Gene3D	Farnesyl Diphosphate Synthase	30	551	IPR008949	-
	Aip08g03002	564	Gene3D	-	71	236	IPR036965	GO:0010333\|GO:0016829
	Aip08g03002	564	Coils	Coil	55	75	-	-
	Aip08g03002	564	Coils	Coil	381	401	-	-
	Aip08g03002	564	SFLD	Isoprenoid Synthase Type I	236	561	-	-
	Aip08g03002	564	Pfam	Terpene synthase, N-terminal domain	32	210	IPR001906	GO:0010333\|GO:0016829
	Aip08g03002	564	PANTHER	TERPENE SYNTHASE 2-RELATED	19	545	-	-
	Aip08g03002	564	ProSiteProfiles	Rhodanese domain profile.	93	154	IPR001763	-
	Aip08g03002	564	SUPERFAMILY	Terpenoid synthases	236	561	IPR008949	-
	Aip08g03002	564	SFLD	Terpene Cyclase Like 1 C Terminal Domain	236	561	IPR034741	-
	Aip08g03002	564	PANTHER	OS04G0344100 PROTEIN-RELATED	19	545	-	-
	Aip08g03002	564	CDD	Terpene_cyclase_plant_C1	23	560	IPR044814	GO:0010333\|GO:0016102

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g03002	Aip-Chr8	119047984	119091728	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g03002	K15803		-	adu:107463233	966.066

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip08g03002	08	119047984	119091728	Aip08g03002	08	119047984	119091728	ECH